Homology analysis

Gene ID At5g48400
Gene name ATGLR1.2
Functional description member of Putative ligand-gated ion channel subunit family

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.8001285At5g48410834896ATGLR1.3member of Putative ligand-gated ion channel subunit familyO.I.C.G.S.X.
0.202e-23111At3g07520819940GLR1.4 (GLUTAMATE RECEPTOR 1.4)member of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.O.I.C.G.S.X.
0.125e-963At3g04110819566GLR1.1 (GLUTAMATE RECEPTOR 1.1)putative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.O.I.C.G.S.X.
0.032e-242At5g27100832768ATGLR2.1member of Putative ligand-gated ion channel subunit familyO.I.C.G.S.X.
0.017e-240At5g11180830988ATGLR2.6member of Putative ligand-gated ion channel subunit familyO.I.C.G.S.X.
0.023e-138At4g17340827446TIP2F:water channel activity;P:transport, response to salt stress;C:plasma membrane, chloroplast, vacuole, membrane;BPMOFAVO.I.C.G.S.X.
0.011e+036At5g48375834891TGG3 (THIOGLUCOSIDE GLUCOSIDASE 3)Is a myrosinase pseudogene that codes for a truncated and frameshifted protein. Although TGG3 apparently is a pseudogene, its mRNA is expressed specifically in stamen and petal according to RT-PCR analysis. Western analysis shows no band of the size expected for a TGG3 protein.O.I.C.G.S.X.
0.011e+036At4g31710829299ATGLR2.4member of Putative ligand-gated ion channel subunit familyO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.024e-138GmaAffx.38430.1.S1_atGlycine maxCA936241--6e-2At5g18420unknown proteinO.I.C.G.S.X.
0.011e-138HVSMEi0003A10r2_s_atHordeum vulgareHVSMEi0003A10r2--4e-2At4g14750IQD19 (IQ-domain 19)O.I.C.G.S.X.
0.016e-138OsAffx.30027.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.043e-242PtpAffx.214267.1.S1_atPopulus trichocarpapmrna27767glutamate-gated kainate-type ion channel receptor subunit GluR5-5e-3At5g11180ATGLR2.6O.I.C.G.S.X.
0.023e-138Ta.30759.2.A1_a_atTriticum aestivumCA608414--4e+0At4g32360NADP adrenodoxin-like ferredoxin reductaseO.I.C.G.S.X.
0.018e-2381617668_atVitis viniferaCF514659hypothetical protein LOC100243346-5e-4At4g11080high mobility group (HMG1/2) family proteinO.I.C.G.S.X.
0.012e+034ZmAffx.617.1.A1_atZea maysAI715045--2e-1At5g09600SDH3-1O.I.C.G.S.X.



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