Homology analysis

Gene ID At5g42340
Gene name binding / ubiquitin-protein ligase
Functional description F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;MPOFBV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.014e-344At2g31890817747RAPProtein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance.O.I.C.G.S.X.
0.012e-242At5g62190836340PRH75DEAD/DEAH box RNA helicase PRH75O.I.C.G.S.X.
0.012e-242At4g179056241286ATL4HPutative RING-H2 finger protein ATL4H.O.I.C.G.S.X.
0.022e-242At3g46510823804PUB13 (PLANT U-BOX 13)Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.O.I.C.G.S.X.
0.012e-242At3g54850824650PUB14Encodes a protein with ubiquitin ligase activity.O.I.C.G.S.X.
0.012e-242At1g60200842315splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing proteinF:nucleotide binding, nucleic acid binding;P:mRNA processing;C:chloroplast;MOFBPVAO.I.C.G.S.X.
0.012e-242At1g05520837054transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:transport, response to salt stress;C:COPII vesicle coat;MFOPO.I.C.G.S.X.
0.016e-240At3g21950821753methyltransferaseF:methyltransferase activity;P:response to cadmium ion;C:cellular_component unknown;POBMFO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.011e+036GmaAffx.30851.2.S1_atGlycine maxBE473679--6e-2At1g19980cytomatrix protein-relatedO.I.C.G.S.X.
0.022e+034Contig21716_atHordeum vulgareContig21716--1e+1At3g27270-O.I.C.G.S.X.
0.012e+036Os02g0700500Oryza sativaAK068055.1-Amino acid/polyamine transporter I family protein4e-6At5g05630amino acid permease family proteinO.I.C.G.S.X.
0.171e-1689PtpAffx.201550.1.S1_atPopulus trichocarpapmrna3045hypothetical protein-1e-12At5g42340binding / ubiquitin-protein ligaseO.I.C.G.S.X.
0.034e-654TaAffx.37258.1.S1_atTriticum aestivumBJ289873--4e+0At5g14660PDF1B (PEPTIDE DEFORMYLASE 1B)O.I.C.G.S.X.
0.021e-3441611462_atVitis viniferaCF403264hypothetical protein LOC100250244-2e-1At4g16295SPH1 (S-PROTEIN HOMOLOGUE 1)O.I.C.G.S.X.
0.012e+034Zm.547.1.A1_atZea maysCK827104glutathione transferase17-1e-1At1g02405proline-rich family proteinO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage