Homology analysis

Gene ID At5g39980
Gene name pentatricopeptide (PPR) repeat-containing protein
Functional description F:unknown;P:biological_process unknown;C:chloroplast;POMFBA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.014e-344At4g20850827833TPP2 (TRIPEPTIDYL PEPTIDASE II)Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.O.I.C.G.S.X.
0.024e-344At1g08710837392F-box family proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MPOABFO.I.C.G.S.X.
0.017e-240At5g64160836537unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOO.I.C.G.S.X.
0.017e-240At4g11690826774pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:endomembrane system;POMFBAO.I.C.G.S.X.
0.027e-240At3g50730824237protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.S.X.
0.013e-138At5g51070835180ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)ATP-dependent Clp protease regulatory subunitO.I.C.G.S.X.
0.013e-138At5g20170832140unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO.I.C.G.S.X.
0.013e-138At5g52630835340MEF1 (MITOCHONDRIAL RNA EDITING FACTOR 1)Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.184e-448GmaAffx.56269.1.S1_atGlycine maxBU761057--2e-3At5g39980pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.021e-138HZ39K11r_atHordeum vulgareHZ39K11r--1e+0At4g15620integral membrane family proteinO.I.C.G.S.X.
0.021e-140OsAffx.6497.1.S1_s_atOryza sativa---0O.I.C.G.S.X.
0.511e-114414PtpAffx.213897.1.S1_atPopulus trichocarpapmrna27099hypothetical protein-1e-114At5g39980pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.022e-242Ta.15707.1.S1_atTriticum aestivumCA486403--4e+0At3g07565DNA bindingO.I.C.G.S.X.
0.023e-1361619411_atVitis viniferaBQ798820--1e+0At4g24440transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)O.I.C.G.S.X.
0.012e+034ZmAffx.170.1.S1_atZea maysAI668224--8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)O.I.C.G.S.X.



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