Homology analysis

Gene ID At5g39630
Gene name vesicle transport v-SNARE family protein
Functional description F:SNARE binding, receptor activity;P:membrane fusion, intra-Golgi vesicle-mediated transport;C:membrane;OMFPBAV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.183e-756At5g39510833947SGR4 (SHOOT GRAVITROPSIM 4)Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12.O.I.C.G.S.X.
0.135e-652At3g29100822557VTI13Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated.O.I.C.G.S.X.
0.022e-240At5g43270834345SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2)member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. The genes are characterized by the presence of the SBP-box, which encodes a protein domain, theO.I.C.G.S.X.
0.033e-136At5g41050834107unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.S.X.
0.023e-136At4g15210827185BAM5 (BETA-AMYLASE 5)cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.O.I.C.G.S.X.
0.013e-136At3g62700825444ATMRP10member of MRP subfamilyO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.034e-136GmaAffx.81798.1.S1_atGlycine maxBG508815--3e-1At5g39630vesicle transport v-SNARE family proteinO.I.C.G.S.X.
0.032e+032HVSMEg0011A19r2_atHordeum vulgareHVSMEg0011A19r2--3e+0At5g39630vesicle transport v-SNARE family proteinO.I.C.G.S.X.
0.036e-136OsAffx.693.2.S1_atOryza sativa---0O.I.C.G.S.X.
0.044e-136PtpAffx.53522.1.S1_atPopulus trichocarpaCV238463hypothetical protein-5e+0At2g45820DNA-binding protein, putativeO.I.C.G.S.X.
0.043e-136TaAffx.115126.1.S1_atTriticum aestivumCA618118--3e-1At5g03710unknown proteinO.I.C.G.S.X.
0.044e-1341622069_atVitis viniferaCD801772--2e+0At1g74340dolichol phosphate-mannose biosynthesis regulatory protein-relatedO.I.C.G.S.X.
0.045e-134Zm.11463.1.S1_atZea maysAW355985hypothetical protein LOC100191695-6e-1At5g39510SGR4 (SHOOT GRAVITROPSIM 4)O.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage