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| Gene ID | At5g39510 |
| Gene name | SGR4 (SHOOT GRAVITROPSIM 4) |
| Functional description | Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.66 | 8e-113 | 406 | At3g29100 | 822557 | VTI13 | Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated. | O.I. | C.G. | S.X. | |
| 0.18 | 3e-7 | 56 | At5g39630 | 833959 | vesicle transport v-SNARE family protein | F:SNARE binding, receptor activity;P:membrane fusion, intra-Golgi vesicle-mediated transport;C:membrane;OMFPBAV | O.I. | C.G. | S.X. | |
| 0.02 | 2e-2 | 40 | At1g19940 | 838583 | AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5) | F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF | O.I. | C.G. | S.X. | |
| 0.01 | 3e-1 | 36 | At4g04340 | 825754 | early-responsive to dehydration protein-related / ERD protein-related | F:unknown;P:unknown;C:plasma membrane;FPMOB | O.I. | C.G. | S.X. | |
| 0.01 | 3e-1 | 36 | At2g25760 | 817118 | protein kinase family protein | F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MBOPFVA | O.I. | C.G. | S.X. | |
| 0.03 | 3e-1 | 36 | At1g26670 | 839208 | VTI1B | member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.12 | 1e-1 | 38 | GmaAffx.88565.1.A1_at | Glycine max | CD394027 | - | - | 2e-1 | At3g29100 | VTI13 | O.I. | C.G. | S.X. | |
| 0.08 | 2e-4 | 46 | Contig9598_at | Hordeum vulgare | Contig9598 | - | - | 5e-4 | At5g39510 | SGR4 (SHOOT GRAVITROPSIM 4) | O.I. | C.G. | S.X. | |
| 0.06 | 2e-1 | 38 | Os01g0707300 | Oryza sativa | AK104463.1 | - | Vesicle transport v-SNARE family protein | 6e-7 | At3g29100 | VTI13 | O.I. | C.G. | S.X. | |
| 0.24 | 1e-7 | 57 | Ptp.340.1.A1_s_at | Populus trichocarpa | CK088453 | hypothetical protein | - | 5e-18 | At3g29100 | VTI13 | O.I. | C.G. | S.X. | |
| 0.06 | 9e-5 | 48 | Ta.10129.2.S1_x_at | Triticum aestivum | CA624739 | - | - | 7e-1 | At3g29100 | VTI13 | O.I. | C.G. | S.X. | |
| 0.09 | 6e-3 | 40 | 1607277_at | Vitis vinifera | CF517203 | hypothetical protein LOC100259152 | - | 4e-17 | At1g26670 | VTI1B | O.I. | C.G. | S.X. | |
| 0.11 | 4e-5 | 48 | Zm.4246.1.A1_at | Zea mays | AI438854 | hypothetical protein LOC100192626 | - | 2e-4 | At5g39510 | SGR4 (SHOOT GRAVITROPSIM 4) | O.I. | C.G. | S.X. |
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