Homology analysis

Gene ID At5g35550
Gene name TT2 (TRANSPARENT TESTA 2)
Functional description TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.131e-1067At5g52600835337AtMYB82 (myb domain protein 82)Member of the R2R3 factor gene family.O.I.C.G.S.X.
0.073e-859At3g23250821904MYB15 (MYB DOMAIN PROTEIN 15)Member of the R2R3 factor gene family.O.I.C.G.S.X.
0.103e-550At4g09460826530ATMYB6Encodes myb6 DNA-binding protein.O.I.C.G.S.X.
0.071e-448At1g66230842938MYB20 (myb domain protein 20)Encodes a putative transcription factor (MYB20).O.I.C.G.S.X.
0.114e-446At5g40330834031MYB23 (MYB DOMAIN PROTEIN 23)Encodes a MYB gene that, when overexpressed ectopically, can induce ectopic trichome formation. It is a member of subgroup 15, together with WER and GL1. Members of this subgroup share a conserved motif of 19 amino acids in the putative transcription activation domain at the C-terminal end. The gene is expressed in leaves, stems, flowers, seeds and roots and quite strongly in trichomes. There is partial functional redundancy between ATMYB23 and GL1. The two proteins are functionally equivalent with respect to the regulation of trichome initiation but not with respect to trichome branching - which is controlled by MYB23 and not GL1.O.I.C.G.S.X.
0.064e-446At1g74430843784MYB95 (myb domain protein 95)Encodes a putative transcription factor (MYB95).O.I.C.G.S.X.
0.044e-446At1g18710838453AtMYB47 (myb domain protein 47)Member of the R2R3 factor gene family.O.I.C.G.S.X.
0.104e-446At1g57560842131AtMYB50 (myb domain protein 50)Member of the R2R3 factor gene family.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.232e-25117GmaAffx.5013.1.S1_atGlycine maxBM092559--2e-13At1g22640MYB3 (MYB DOMAIN PROTEIN 3)O.I.C.G.S.X.
0.037e-134HVSMEk0018E17r2_atHordeum vulgareHVSMEk0018E17r2--7e-1At4g13965-O.I.C.G.S.X.
0.055e-1169Os03g0410000Oryza sativaD88619.1-R2R3 Myb transcription factor MYB-IF255e-11At5g35550TT2 (TRANSPARENT TESTA 2)O.I.C.G.S.X.
0.224e-2099PtpAffx.8131.5.A1_a_atPopulus trichocarpaBU891795--3e-20At5g35550TT2 (TRANSPARENT TESTA 2)O.I.C.G.S.X.
0.081e-138TaAffx.110371.1.S1_atTriticum aestivumCA695662--7e-2At5g35550TT2 (TRANSPARENT TESTA 2)O.I.C.G.S.X.
0.073e-5481620713_s_atVitis viniferaCB970375flavonoid-related R2R3 MYB 4a repressor transcription factor-3e-58At4g38620MYB4O.I.C.G.S.X.
0.082e-446Zm.13870.1.S1_atZea maysAY237128.1myb-related protein c1-I-2K1-4e-4At5g35550TT2 (TRANSPARENT TESTA 2)O.I.C.G.S.X.



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