Homology analysis

Gene ID At5g27530
Gene name glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Functional description F:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMVA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.542e-102373At4g35670829719glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVAO.I.C.G.S.X.
0.158e-1375At5g44840834514glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.S.X.
0.065e-859At5g44830834513glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMAO.I.C.G.S.X.
0.042e-448At1g23460838954polygalacturonaseF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.S.X.
0.023e-344At3g57510824918ADPG1Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.O.I.C.G.S.X.
0.014e-240At3g54540824619ATGCN4member of GCN subfamilyO.I.C.G.S.X.
0.062e-138At1g70500843386polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.S.X.
0.017e-136At5g67240836859SDN3 (SMALL RNA DEGRADING NUCLEASE 3)F:exonuclease activity, nucleic acid binding;P:unknown;C:intracellular;MFOPBAO.I.C.G.S.X.
0.017e-136At5g51200835195unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPFOO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.043e-448Gma.8494.1.S1_atGlycine maxAF128266.1polygalacturonase PG1-2e-8At1g10640polygalacturonaseO.I.C.G.S.X.
0.033e-136HB31C18r_atHordeum vulgareHB31C18r--3e-1At4g35670glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.C.G.S.X.
0.029e-240Os07g0208100Oryza sativaAK119482.1-Polygalacturonase A (Fragment)7e-1At1g10640polygalacturonaseO.I.C.G.S.X.
0.041e+036PtpAffx.222982.1.S1_atPopulus trichocarpapmrna40736hypothetical protein-4e-42At1g23460polygalacturonaseO.I.C.G.S.X.
0.037e-136TaAffx.56906.1.S1_atTriticum aestivumCA640759--8e-3At1g10640polygalacturonaseO.I.C.G.S.X.
0.033e-6521617208_atVitis viniferaAF159125.1polygalacturonase-8e-9At5g14650polygalacturonase, putative / pectinase, putativeO.I.C.G.S.X.
0.021e+034Zm.15509.1.A1_atZea maysAY109235.1ligatin-4e-10At1g09150pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing proteinO.I.C.G.S.X.



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