Homology analysis

Gene ID At5g25940
Gene name early nodulin-related
Functional description F:molecular_function unknown;P:unknown;C:mitochondrion;P

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.027e-134At1g33250840219fringe-related proteinF:transferase activity, transferring glycosyl groups;P:unknown;C:chloroplast, membrane;MPFOO.I.C.G.S.X.
0.047e-134At1g51510841576Y14This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.O.I.C.G.S.X.
0.027e-134At1g56190842072phosphoglycerate kinase, putativeF:phosphoglycerate kinase activity;P:response to cadmium ion, glycolysis;C:thylakoid, mitochondrion, chloroplast stroma, chloroplast, membrane;OBPMAFO.I.C.G.S.X.
0.023e+032At5g02130831694NDP1 (RANDOM POTATO CDNA CLONE)mutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light ChainO.I.C.G.S.X.
0.043e+032At4g12140826822zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVO.I.C.G.S.X.
0.033e+032At2g29630817513THIC (ThiaminC)Encodes a protein involved in thiamine biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. The THIC transcript is regulated by a TPP riboswitch in the 3' UTR. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.112e-756GmaAffx.84535.1.S1_s_atGlycine maxBE609257--3e-7At5g25940early nodulin-relatedO.I.C.G.S.X.
0.118e-546Contig7703_atHordeum vulgareContig7703--4e-4At5g25940early nodulin-relatedO.I.C.G.S.X.
0.072e-550Os02g0227200Oryza sativaAB018377.1-Early nodulin2e-5At5g25940early nodulin-relatedO.I.C.G.S.X.
0.071e-963Ptp.2168.1.S1_atPopulus trichocarpaCA927090--2e-9At5g25940early nodulin-relatedO.I.C.G.S.X.
0.101e-240Ta.2360.1.S1_atTriticum aestivumBJ271661--3e-2At5g25940early nodulin-relatedO.I.C.G.S.X.
0.051e+1281620967_atVitis viniferaCF211482hypothetical protein LOC100256944-6e+0At5g53360seven in absentia (SINA) family proteinO.I.C.G.S.X.
0.142e-1167Zm.4143.1.A1_atZea maysBQ779421monooxygenase/ oxidoreductase-1e-10At5g25940early nodulin-relatedO.I.C.G.S.X.

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