Homology analysis

Gene ID At5g24470
Functional description Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.081e-656At2g46790819292APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9)Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay.O.I.C.G.S.X.
0.043e-448At2g46670819279pseudo-response regulator, putative / timing of CAB expression 1-like protein, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBO.I.C.G.S.X.
0.041e-346At5g60100836132APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3)Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL.O.I.C.G.S.X.
0.016e-240At5g02810831793PRR7 (PSEUDO-RESPONSE REGULATOR 7)PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels.O.I.C.G.S.X.
0.016e-240At2g46900819303-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAO.I.C.G.S.X.
0.013e-138At5g57270835832unknown proteinF:unknown;P:unknown;C:unknown;POBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.146e-1273GmaAffx.86733.1.S1_s_atGlycine maxBI469444--1e-18At2g46790APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9)O.I.C.G.S.X.
0.018e+032Contig17653_atHordeum vulgareContig17653--4e+0At3g05746unknown proteinO.I.C.G.S.X.
0.032e+036Os11g0157600Oryza sativaAK120059.1-ABI3-interacting protein, AIP11e-9At2g46790APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9)O.I.C.G.S.X.
0.183e-26121Ptp.5249.1.S1_atPopulus trichocarpaAI162115pseudo response regulator-1e-26At5g24470APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5)O.I.C.G.S.X.
0.024e+034TaAffx.50822.1.S1_atTriticum aestivumCA734940--7e-1At3g05830-O.I.C.G.S.X.
0.033e-4461608006_atVitis viniferaCF517298hypothetical protein LOC100246836-5e-10At2g46670pseudo-response regulator, putative / timing of CAB expression 1-like protein, putativeO.I.C.G.S.X.
0.014e-136Zm.17122.1.A1_atZea maysCF021478hypothetical protein LOC100272978-1e-11At1g20575dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putativeO.I.C.G.S.X.

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