CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.01	7e-2	40	At2g37960	818373	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOFMP	O.I.	C.G.	S.X.
0.01	1e+0	36	At4g34100	829556	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:unknown;C:chloroplast;MPOFV	O.I.	C.G.	S.X.
0.01	1e+0	36	At4g26300	828736	emb1027 (embryo defective 1027)	F:nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding;P:embryonic development ending in seed dormancy, arginyl-tRNA aminoacylation;C:mitochondrion, chloroplast;OBMAFPV	O.I.	C.G.	S.X.
0.01	1e+0	36	At4g35380	829691	guanine nucleotide exchange family protein	F:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBA	O.I.	C.G.	S.X.
0.01	1e+0	36	At3g28630	822493	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.07	5e-22	107	GmaAffx.24635.1.A1_at	Glycine max	CD418601	-	-	9e-23	At5g23880	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)	O.I.	C.G.	S.X.
0.05	1e-14	81	Contig16128_at	Hordeum vulgare	Contig16128	-	-	7e-15	At5g23880	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)	O.I.	C.G.	S.X.
0.19	1e-20	103	Os09g0569400	Oryza sativa	AK063384.1	-	RNA-metabolising metallo-beta-lactamase domaincontaining protein	7e-21	At5g23880	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)	O.I.	C.G.	S.X.
0.22	1e-19	99	PtpAffx.103932.1.S1_at	Populus trichocarpa	CX175756	-	-	5e-20	At5g23880	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)	O.I.	C.G.	S.X.
0.04	5e-9	63	Ta.12414.1.S1_at	Triticum aestivum	BQ172285	-	-	2e-9	At5g23880	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)	O.I.	C.G.	S.X.
0.01	1e+0	34	1617120_s_at	Vitis vinifera	CF208320	hypothetical protein LOC100265095	-	1e+0	At4g18593	dual specificity protein phosphatase-related	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.1231.2.S1_a_at	Zea mays	BG841390	-	-	1e+0	At4g24350	phosphorylase family protein	O.I.	C.G.	S.X.

Gene ID	At5g23880
Gene name	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)
Functional description	Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.