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| Gene ID | At5g23570 |
| Gene name | SGS3 (SUPPRESSOR OF GENE SILENCING 3) |
| Functional description | Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.01 | 2e-1 | 38 | At4g02220 | 828106 | zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein | F:zinc ion binding;P:unknown;C:cytoplasm;MOFP | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At4g31210 | 829248 | DNA topoisomerase family protein | F:DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding;P:DNA topological change, DNA unwinding during replication, DNA metabolic process;C:chromosome;OBMFAPV | O.I. | C.G. | S.X. | |
| 0.02 | 9e-1 | 36 | At5g62750 | 836396 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At5g54510 | 835539 | DFL1 (DWARF IN LIGHT 1) | Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At5g20640 | 832187 | unknown protein | F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;P | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At5g65760 | 836705 | serine carboxypeptidase S28 family protein | F:serine-type peptidase activity;P:proteolysis;C:chloroplast, vacuole;MOFPB | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At4g01400 | 827943 | - | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At4g26300 | 828736 | emb1027 (embryo defective 1027) | F:nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding;P:embryonic development ending in seed dormancy, arginyl-tRNA aminoacylation;C:mitochondrion, chloroplast;OBMAFPV | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At3g50650 | 824228 | scarecrow-like transcription factor 7 (SCL7) | F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PMFOBV | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.06 | 1e-3 | 46 | GmaAffx.60237.1.S1_at | Glycine max | BM567800 | - | - | 2e-4 | At5g23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | O.I. | C.G. | S.X. | |
| 0.03 | 7e-3 | 42 | Contig5840_at | Hordeum vulgare | Contig5840 | - | - | 2e-2 | At5g23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | O.I. | C.G. | S.X. | |
| 0.02 | 3e-2 | 42 | Os12g0197500 | Oryza sativa | AK064217.1 | - | XS zinc finger domain containing protein | 2e-2 | At5g23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | O.I. | C.G. | S.X. | |
| 0.09 | 3e-4 | 48 | PtpAffx.78442.1.A1_at | Populus trichocarpa | CA930182 | hypothetical protein | - | 1e-4 | At5g23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | O.I. | C.G. | S.X. | |
| 0.02 | 7e-5 | 50 | Ta.8426.1.S1_at | Triticum aestivum | CD907200 | - | - | 5e-5 | At5g23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | O.I. | C.G. | S.X. | |
| 0.07 | 5e-6 | 52 | 1617373_s_at | Vitis vinifera | CA816697 | hypothetical protein LOC100245878 | - | 5e-6 | At5g23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | O.I. | C.G. | S.X. | |
| 0.01 | 2e+0 | 34 | Zm.19344.1.A1_at | Zea mays | CO530680 | - | - | 3e-2 | At2g48075 | unknown protein | O.I. | C.G. | S.X. |
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