Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | At5g23405 |
| Gene name | high mobility group (HMG1/2) family protein |
| Functional description | F:DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFBV |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.29 | 4e-15 | 81 | At5g23420 | 832408 | HMGB6 | Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain. | O.I. | C.G. | S.X. | |
| 0.03 | 4e-3 | 42 | At5g14390 | 831290 | - | F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMPFV | O.I. | C.G. | S.X. | |
| 0.04 | 4e-3 | 42 | At1g51730 | 841598 | RWD domain-containing protein | F:unknown;P:biological_process unknown;C:cellular_component unknown;MFOPB | O.I. | C.G. | S.X. | |
| 0.01 | 1e-2 | 40 | At1g06900 | 837200 | catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | F:metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding;P:proteolysis;C:cellular_component unknown;MOBFPVA | O.I. | C.G. | S.X. | |
| 0.00 | 1e-2 | 40 | At1g70320 | 843368 | UPL2 (UBIQUITIN-PROTEIN LIGASE 2) | encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | O.I. | C.G. | S.X. | |
| 0.03 | 6e-2 | 38 | At4g03210 | 828024 | XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9) | encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers. | O.I. | C.G. | S.X. | |
| 0.02 | 6e-2 | 38 | At2g25180 | 817056 | ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12) | Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.06 | 3e-1 | 36 | Gma.5891.1.S1_at | Glycine max | BQ610212 | - | - | 1e-1 | At5g23405 | high mobility group (HMG1/2) family protein | O.I. | C.G. | S.X. | |
| 0.06 | 4e-1 | 34 | Contig22019_at | Hordeum vulgare | Contig22019 | - | - | 7e-1 | At5g23405 | high mobility group (HMG1/2) family protein | O.I. | C.G. | S.X. | |
| 0.06 | 7e-3 | 42 | Os08g0126200 | Oryza sativa | 9636.m00237 | - | - | 2e-4 | At3g50550 | unknown protein | O.I. | C.G. | S.X. | |
| 0.05 | 3e-1 | 36 | PtpAffx.215294.1.S1_at | Populus trichocarpa | pmrna29389 | hypothetical protein | - | 1e-1 | At5g23405 | high mobility group (HMG1/2) family protein | O.I. | C.G. | S.X. | |
| 0.04 | 2e-1 | 36 | TaAffx.827.1.A1_at | Triticum aestivum | BJ310377 | - | - | 3e-1 | At5g23405 | high mobility group (HMG1/2) family protein | O.I. | C.G. | S.X. | |
| 0.08 | 1e-3 | 42 | 1612070_at | Vitis vinifera | CF413850 | hypothetical protein LOC100247584 | - | 2e-11 | At5g23420 | HMGB6 | O.I. | C.G. | S.X. | |
| 0.04 | 2e-2 | 38 | Zm.6201.1.A1_at | Zea mays | BE643575 | - | - | 1e-1 | At3g50690 | leucine-rich repeat family protein | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage