Homology analysis

Gene ID At5g22250
Gene name CCR4-NOT transcription complex protein, putative
Functional description F:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOF

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.699e-64244At3g44260823551CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:response to biotic stimulus, response to wounding, RNA modification;C:nucleus;MPOFO.I.C.G.S.X.
0.073e-240At5g10960830963CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOFO.I.C.G.S.X.
0.071e-138At1g80780844417CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOFO.I.C.G.S.X.
0.024e-136At2g361108181843'-5' exonuclease domain-containing proteinF:3'-5' exonuclease activity, nucleic acid binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:intracellular;MPOBFVO.I.C.G.S.X.
0.034e-136At2g32350817796-F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;POMVFO.I.C.G.S.X.
0.022e+034At4g36810829834GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1)Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.O.I.C.G.S.X.
0.012e+034At4g37590829914NPY5 (NAKED PINS IN YUC MUTANTS 5)A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.O.I.C.G.S.X.
0.012e+034At2g453008191383-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseencodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesisO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.367e-1685GmaAffx.93108.1.S1_s_atGlycine maxCF808027--3e-16At5g22250CCR4-NOT transcription complex protein, putativeO.I.C.G.S.X.
0.023e+032Contig16542_atHordeum vulgareContig16542--3e-1At3g22421F-box family proteinO.I.C.G.S.X.
0.023e+034Os02g0667901Oryza sativa9630.m04332--1e+0At5g22250CCR4-NOT transcription complex protein, putativeO.I.C.G.S.X.
0.344e-1789PtpAffx.9762.1.S1_atPopulus trichocarpaCV244752--1e-26At3g44260CCR4-NOT transcription complex protein, putativeO.I.C.G.S.X.
0.032e+034TaAffx.79857.1.S1_atTriticum aestivumCA707278--4e+0At5g56260dimethylmenaquinone methyltransferase family proteinO.I.C.G.S.X.
0.297e-281231622598_atVitis viniferaCF372747hypothetical protein LOC100253485-3e-27At5g22250CCR4-NOT transcription complex protein, putativeO.I.C.G.S.X.
0.033e+032ZmAffx.1398.1.S1_atZea mays40794996-73--2e-1At2g15500-O.I.C.G.S.X.



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