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| Gene ID | At5g22000 |
| Gene name | RHF2A (RING-H2 GROUP F2A) |
| Functional description | encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.02 | 4e-2 | 40 | At5g01980 | 831911 | zinc finger (C3HC4-type RING finger) family protein | F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVB | O.I. | C.G. | S.X. | |
| 0.02 | 1e-1 | 38 | At4g24240 | 828525 | WRKY7 | Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. | O.I. | C.G. | S.X. | |
| 0.01 | 1e-1 | 38 | At4g17380 | 827450 | MSH4 (MUTS HOMOLOG 4) | Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination. | O.I. | C.G. | S.X. | |
| 0.02 | 1e-1 | 38 | At4g14220 | 827062 | RHF1A (RING-H2 GROUP F1A) | encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond. | O.I. | C.G. | S.X. | |
| 0.01 | 1e-1 | 38 | At3g24900 | 822088 | AtRLP39 (Receptor Like Protein 39) | F:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAV | O.I. | C.G. | S.X. | |
| 0.01 | 1e-1 | 38 | At1g01590 | 837194 | FRO1 (FERRIC REDUCTION OXIDASE 1) | Encodes a ferric-chelate reductase that is expressed at extremely low levels in Fe deficiency-induced seedlings. | O.I. | C.G. | S.X. | |
| 0.02 | 6e-1 | 36 | At4g11660 | 826771 | AT-HSFB2B | member of Heat Stress Transcription Factor (Hsf) family | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.19 | 7e-29 | 129 | Gma.5939.2.S1_at | Glycine max | BU760891 | - | - | 2e-21 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | C.G. | S.X. | |
| 0.11 | 4e-25 | 115 | Contig8100_at | Hordeum vulgare | Contig8100 | - | - | 1e-24 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | C.G. | S.X. | |
| 0.11 | 2e-17 | 91 | Os11g0572500 | Oryza sativa | AY323129.1 | - | - | 2e-17 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | C.G. | S.X. | |
| 0.35 | 3e-22 | 107 | PtpAffx.205097.1.S1_at | Populus trichocarpa | pmrna10098 | - | - | 9e-23 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | C.G. | S.X. | |
| 0.12 | 1e-29 | 131 | Ta.4382.1.S1_at | Triticum aestivum | CK158657 | RING-H2 finger protein | - | 2e-29 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | C.G. | S.X. | |
| 0.03 | 7e-1 | 34 | 1622507_at | Vitis vinifera | CB975105 | - | - | 6e-20 | At1g51410 | cinnamyl-alcohol dehydrogenase, putative (CAD) | O.I. | C.G. | S.X. | |
| 0.04 | 2e-1 | 36 | Zm.15485.1.S1_at | Zea mays | CD446373 | - | - | 8e-1 | At5g22000 | RHF2A (RING-H2 GROUP F2A) | O.I. | C.G. | S.X. |
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