Homology analysis

Gene ID At5g18520
Gene name -
Functional description F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFB

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.503e-89329At3g09570820114-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane;MPOFBO.I.C.G.S.X.
0.241e-861At5g02630831851-F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFO.I.C.G.S.X.
0.047e-446At5g42090834214-F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFO.I.C.G.S.X.
0.027e-446At3g53110824477LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.O.I.C.G.S.X.
0.023e-344At5g05510830434protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBO.I.C.G.S.X.
0.023e-344At4g35900829744FDbZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia.O.I.C.G.S.X.
0.023e-344At1g66620842980seven in absentia (SINA) protein, putativeF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:nucleus;MOFPBVAO.I.C.G.S.X.
0.023e-344At1g29540839831unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.011e-242At2g01570814686RGA1 (REPRESSOR OF GA1-3 1)Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.407e-54212GmaAffx.82783.1.S1_atGlycine maxBG653673--5e-54At5g18520-O.I.C.G.S.X.
0.068e-238Contig14805_atHordeum vulgareContig14805--5e-16At5g42090-O.I.C.G.S.X.
0.063e-448Os05g0462500Oryza sativaAK064348.1-Lung seven transmembrane receptor family protein2e-4At5g18520-O.I.C.G.S.X.
0.346e-42173PtpAffx.59090.1.A1_atPopulus trichocarpaCV283598hypothetical protein-2e-74At3g09570-O.I.C.G.S.X.
0.042e-138Ta.9129.3.S1_atTriticum aestivumCD879705--2e-13At5g42090-O.I.C.G.S.X.
0.302e-512021609751_atVitis viniferaCA817020hypothetical protein LOC100253636-5e-51At5g18520-O.I.C.G.S.X.
0.033e-136Zm.17275.1.A1_atZea maysCF244151hypothetical protein LOC100273442-1e-33At5g42090-O.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage