Homology analysis

Gene ID At5g16680
Gene name PHD finger family protein
Functional description F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:unknown;MOFBPVA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.312e-65252At3g02890821192PHD finger protein-relatedF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVAO.I.C.G.S.X.
0.013e-242At5g59000836017zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.C.G.S.X.
0.013e-242At5g17580831624phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;POAMO.I.C.G.S.X.
0.013e-242At2g47450819358CAO (CHAOS)A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.O.I.C.G.S.X.
0.013e-242At2g20280816547zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.C.G.S.X.
0.011e-140At5g24290832496integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVAO.I.C.G.S.X.
0.011e-140At5g03800831717EMB175 (EMBRYO DEFECTIVE 175)Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality.O.I.C.G.S.X.
0.011e-140At5g58930836010unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POFMO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.012e-140GmaAffx.13148.1.S1_atGlycine maxBF596896--9e-10At5g57520ZFP2 (ZINC FINGER PROTEIN 2)O.I.C.G.S.X.
0.016e-240Contig11997_atHordeum vulgareContig11997--1e+0At4g19390-O.I.C.G.S.X.
0.012e-140Os10g0572400Oryza sativaAK062550.1-Hypothetical protein2e-1At5g16680PHD finger family proteinO.I.C.G.S.X.
0.021e-863PtpAffx.215114.1.S1_atPopulus trichocarpapmrna29102hypothetical protein-8e-9At5g16680PHD finger family proteinO.I.C.G.S.X.
0.011e-140Ta.12423.2.S1_atTriticum aestivumBG907159--2e-4At3g20680unknown proteinO.I.C.G.S.X.
0.016e-1361617637_atVitis viniferaCB974429hypothetical protein LOC100245010-1e-3At1g20220nucleic acid bindingO.I.C.G.S.X.
0.012e-138Zm.5985.2.A1_atZea maysAY104529.1hypothetical protein LOC100217272-2e-34At3g51270ATP binding / catalytic/ protein serine/threonine kinaseO.I.C.G.S.X.



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