Homology analysis

Gene ID At5g15630
Gene name IRX6
Functional description Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.265e-1479At5g60920836213COB (COBRA)Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.O.I.C.G.S.X.
0.113e-1273At3g29810822697COBL2 (COBRA-LIKE PROTEIN 2 PRECURSOR)F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;PO.I.C.G.S.X.
0.187e-1065At3g02210821245COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.S.X.
0.024e-550At5g49270834987SHV2 (SHAVEN 2)Involved in successfully establishing tip growth in root hairs.O.I.C.G.S.X.
0.013e-344At4g38590830016glycosyl hydrolase family 35 proteinputative beta-galactosidase (BGAL14 gene)O.I.C.G.S.X.
0.023e-344At4g12740826886adenine-DNA glycosylase-related / MYH-relatedF:hydrolase activity, 4 iron, 4 sulfur cluster binding, catalytic activity, endonuclease activity;P:DNA repair, base-excision repair;C:unknown;MOBFPVAO.I.C.G.S.X.
0.023e-344At1g18790838461RWP-RK domain-containing proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PMOBO.I.C.G.S.X.
0.011e-242At5g58000835911-F:unknown;P:unknown;C:endoplasmic reticulum, chloroplast;MOPFVBO.I.C.G.S.X.
0.011e-242At4g38440830001-F:unknown;P:unknown;C:chloroplast;MFPOBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.295e-24113Gma.12211.2.S1_atGlycine maxBQ299492--2e-24At5g15630IRX6O.I.C.G.S.X.
0.078e-548Contig4221_atHordeum vulgareContig4221--4e-9At3g29810COBL2 (COBRA-LIKE PROTEIN 2 PRECURSOR)O.I.C.G.S.X.
0.102e-861Os05g0386800Oryza sativaAK070472.1--2e-17At5g60920COB (COBRA)O.I.C.G.S.X.
0.319e-38159PtpAffx.249.472.S1_atPopulus trichocarpaCK098335--8e-38At5g15630IRX6O.I.C.G.S.X.
0.104e-240TaAffx.143995.13.S1_atTriticum aestivumAY188332--5e-11At5g60920COB (COBRA)O.I.C.G.S.X.
0.131e-8591621414_atVitis viniferaCB971931hypothetical protein LOC100263436-1e-36At3g02210COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)O.I.C.G.S.X.
0.093e-446Zm.477.1.A2_a_atZea maysAY109348.1brittle stalk-2-like protein 3-1e-15At5g60920COB (COBRA)O.I.C.G.S.X.



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