Homology analysis

Gene ID At5g13300
Gene name SFC (SCARFACE)
Functional description Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.226e-21103At5g61980836319AGD1 (ARF-GAP domain 1)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD1 belongs to the class 1, together with AGD2, AGD3 and AGD4. Not expressed in hypocotyls and cotyledons.O.I.C.G.S.X.
0.045e-654At1g60860842378AGD2 (ARF-GAP DOMAIN 2)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD2 belongs to the class 1, together with AGD1, AGD3, and AGD4.O.I.C.G.S.X.
0.031e-346At1g10870837629AGD4 (ARF-GAP domain 4)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.O.I.C.G.S.X.
0.013e-138At2g19950816514GC1 (Golgin Candidate 1)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.O.I.C.G.S.X.
0.011e+036At5g46380834681unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPBMFO.I.C.G.S.X.
0.011e+036At5g15070831359acid phosphatase/ oxidoreductase/ transition metal ion bindingF:oxidoreductase activity, transition metal ion binding, acid phosphatase activity;P:unknown;C:cellular_component unknown;MFOPBO.I.C.G.S.X.
0.011e+036At4g29380829059protein kinase family protein / WD-40 repeat family proteinF:protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:CUL4 RING ubiquitin ligase complex;MOFPBVAO.I.C.G.S.X.
0.011e+036At3g47390823893cytidine/deoxycytidylate deaminase family proteinF:in 6 functions;P:riboflavin biosynthetic process;C:unknown;BOAFPMVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.124e-29131GmaAffx.22344.1.S1_atGlycine maxBE820249--2e-29At5g13300SFC (SCARFACE)O.I.C.G.S.X.
0.019e+032Contig15683_atHordeum vulgareContig15683--4e-1At3g05220heavy-metal-associated domain-containing proteinO.I.C.G.S.X.
0.282e-44182Os09g0510700Oryza sativaAK073117.1-ADP-ribosylation factor GTPase-activating proteinGCS11e-44At5g13300SFC (SCARFACE)O.I.C.G.S.X.
0.500698PtpAffx.203391.1.S1_atPopulus trichocarpapmrna6747hypothetical protein-0At5g13300SFC (SCARFACE)O.I.C.G.S.X.
0.023e-138TaAffx.112607.1.S1_atTriticum aestivumCA622572--4e+0At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.C.G.S.X.
0.016e+0321619475_a_atVitis viniferaBQ792147hypothetical protein LOC100247673-7e-2At5g64816unknown proteinO.I.C.G.S.X.
0.015e-136Zm.599.2.A1_atZea maysAY111360.1Chromomethylase-2e+0At3g30350unknown proteinO.I.C.G.S.X.

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