Homology analysis

Gene ID At5g07880
Gene name SNAP29
Functional description member of mammalian SNAP25 Gene Family, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.332e-1893At5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationO.I.C.G.S.X.
0.024e-136At5g56860835788GNC (GATA, nitrate-inducible, carbon metabolism-involved)F:transcription factor activity;P:glucose mediated signaling, regulation of nitrogen compound metabolic process;C:nucleus;FPOMBO.I.C.G.S.X.
0.034e-136At2g28900817439ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1)Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment.O.I.C.G.S.X.
0.014e-136At1g05830837093ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2)Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.O.I.C.G.S.X.
0.012e+034At5g04360830315ATLDA (LIMIT DEXTRINASE)Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.O.I.C.G.S.X.
0.012e+034At5g16340831495AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVO.I.C.G.S.X.
0.012e+034At5g16370831498AAE5 (ACYL ACTIVATING ENZYME 5)F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPAVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.032e+034GmaAffx.16347.1.S1_atGlycine maxAW277924--5e-1At5g07880SNAP29O.I.C.G.S.X.
0.033e+032Contig25750_atHordeum vulgareContig25750--4e+0At5g07880SNAP29O.I.C.G.S.X.
0.043e+034OsAffx.17932.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.045e-136PtpAffx.222095.1.S1_s_atPopulus trichocarpapmrna39311hypothetical protein-1e-1At5g07880SNAP29O.I.C.G.S.X.
0.032e+034Ta.19204.2.S1_x_atTriticum aestivumCA717149--3e-2At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.C.G.S.X.
0.032e+0321610282_atVitis viniferaCF214089--1e-2At5g59560SRR1 (SENSITIVITY TO RED LIGHT REDUCED 1)O.I.C.G.S.X.
0.036e-134Zm.19178.1.S1_atZea maysCO517732hypothetical protein LOC100193037-2e+0At5g07880SNAP29O.I.C.G.S.X.

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