Homology analysis

Gene ID At5g06320
Gene name NHL3
Functional description encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.332e-21103At3g11650820337NHL2Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplastO.I.C.G.S.X.
0.152e-1169At2g35460818111harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.019e-238At5g04480830327-F:molecular_function unknown;P:biosynthetic process;C:Golgi apparatus;BOPAO.I.C.G.S.X.
0.039e-238At1g47970841215unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVAO.I.C.G.S.X.
0.013e-136At3g10660820235CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2)predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.O.I.C.G.S.X.
0.023e-136At2g34060817967peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMO.I.C.G.S.X.
0.023e-136At2g33290817892SUVH2 (SU(VAR)3-9 HOMOLOG 2)Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. Gene is expressed in rosettes, stems, floral buds, and flowers by RT-PCR.O.I.C.G.S.X.
0.011e+034At4g19460827687glycosyl transferase family 1 proteinF:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMFO.I.C.G.S.X.
0.021e+034At4g05530825905IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.078e-342GmaAffx.14833.1.S1_atGlycine maxBM525300--5e-3At5g06320NHL3O.I.C.G.S.X.
0.033e+032Contig21492_atHordeum vulgareContig21492--4e+0At3g58190LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)O.I.C.G.S.X.
0.043e+034OsAffx.9115.1.S1_x_atOryza sativa---0O.I.C.G.S.X.
0.032e+034PtpAffx.5749.1.A1_atPopulus trichocarpaCV235708nucleosome/chromatin assembly factor group-8e-20At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)O.I.C.G.S.X.
0.044e-136TaAffx.51102.1.S1_atTriticum aestivumCA731089--2e-1At5g06320NHL3O.I.C.G.S.X.
0.032e+0321620110_s_atVitis viniferaBQ793418similar to BY-2 kinesin-like protein 10-1e+0At4g36820unknown proteinO.I.C.G.S.X.
0.049e-340Zm.11906.1.A1_atZea maysBM381688--1e-2At5g06320NHL3O.I.C.G.S.X.

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