Homology analysis

Gene ID At5g06260
Gene name nucleolar protein-related
Functional description F:calcium ion binding;P:N-terminal protein myristoylation;C:cellular_component unknown;MOPF

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.6301320At4g34070829553calcium ion bindingF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.C.G.S.X.
0.181e-122440At2g45380819145-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.S.X.
0.166e-66252At2g44850819094unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO.I.C.G.S.X.
0.014e-240At4g18050827530PGP9 (P-GLYCOPROTEIN 9)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVO.I.C.G.S.X.
0.014e-240At3g62200825393-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBVO.I.C.G.S.X.
0.016e-136At4g25540828659MSH3 (Arabidopsis homolog of DNA mismatch repair protein MSH3)encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).O.I.C.G.S.X.
0.013e+034At5g23910832456ATP binding / microtubule motorF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOPFBO.I.C.G.S.X.
0.013e+034At5g59920836114ULI3Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.163e-1067Gma.7035.1.S1_atGlycine maxAW348267--8e-11At5g06260nucleolar protein-relatedO.I.C.G.S.X.
0.073e-446Contig11560_atHordeum vulgareContig11560--9e-4At5g06260nucleolar protein-relatedO.I.C.G.S.X.
0.043e-138Os12g0157200Oryza sativaAK064843.1-TLDc domain containing protein2e-1At4g34070calcium ion bindingO.I.C.G.S.X.
0.176e-1169PtpAffx.24548.1.S1_atPopulus trichocarpaDN496345hypothetical protein-6e-11At5g06260nucleolar protein-relatedO.I.C.G.S.X.
0.027e-136TaAffx.109201.1.S1_atTriticum aestivumCA678776--7e-1At4g19830immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.C.G.S.X.
0.027e-1341606438_atVitis viniferaCF215256hypothetical protein LOC100250419-1e+0At4g39140protein binding / zinc ion bindingO.I.C.G.S.X.
0.082e-240Zm.2508.1.A1_atZea maysCD447996hypothetical protein LOC100280213-6e-2At5g06260nucleolar protein-relatedO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage