Homology analysis

Gene ID At5g05390
Gene name LAC12 (laccase 12)
Functional description putative laccase, a member of laccase family of genes (17 members in Arabidopsis).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.375e-24113At2g40370818630LAC5 (laccase 5)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.
0.072e-861At5g48100834862TT10 (TRANSPARENT TESTA 10)Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.O.I.C.G.S.X.
0.082e-861At2g38080818386IRX12 (IRREGULAR XYLEM 12)Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.O.I.C.G.S.X.
0.082e-757At5g01190831697LAC10 (laccase 10)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.
0.112e-757At5g03260831887LAC11 (laccase 11)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.
0.144e-654At5g07130830604LAC13 (laccase 13)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.
0.032e-448At5g58910836008LAC16 (laccase 16)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.
0.049e-446At5g09360830795LAC14 (laccase 14)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.
0.039e-446At5g60020836124LAC17 (laccase 17)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.242e-1895Gma.8441.1.S1_atGlycine maxAY113187.2diphenol oxidase laccase-1e-18At5g05390LAC12 (laccase 12)O.I.C.G.S.X.
0.024e-136HVSMEa0005O15r2_s_atHordeum vulgareHVSMEa0005O15r2--3e-2At3g09032unknown proteinO.I.C.G.S.X.
0.052e-656Os12g0108000Oryza sativaAK109523.1-Laccase precursor (EC 1.10.3.2)1e-6At5g05390LAC12 (laccase 12)O.I.C.G.S.X.
0.143e-1377Ptp.1273.1.S1_atPopulus trichocarpaCV228408laccase 90a-2e-20At2g40370LAC5 (laccase 5)O.I.C.G.S.X.
0.046e-240Ta.7346.2.S1_atTriticum aestivumBJ313080--5e-2At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)O.I.C.G.S.X.
0.091e-9631612157_atVitis viniferaCF213489hypothetical protein LOC100262045-1e-9At5g05390LAC12 (laccase 12)O.I.C.G.S.X.
0.011e+034Zm.4828.1.A1_atZea maysCA402577--1e-3At1g55475unknown proteinO.I.C.G.S.X.



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