Homology analysis

Gene ID At5g04460
Gene name protein binding / zinc ion binding
Functional description F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFBV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.013e-138At4g20940827842leucine-rich repeat family proteinF:protein binding;P:signal transduction, N-terminal protein myristoylation;C:plasma membrane;PMOBFAVO.I.C.G.S.X.
0.013e-138At2g40030818591NRPD1BEncodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.O.I.C.G.S.X.
0.001e+036At5g40480834046EMB3012 (embryo defective 3012)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MOBPO.I.C.G.S.X.
0.011e+036At5g40380834036protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.S.X.
0.011e+036At2g47640819377small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putativeF:molecular_function unknown;P:unknown;C:nucleolus, small nucleolar ribonucleoprotein complex, nucleus;MFOPAO.I.C.G.S.X.
0.011e+036At1g68330843162unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.C.G.S.X.
0.015e+034At5g05700830454ATE1 (ARGININE-TRNA PROTEIN TRANSFERASE 1)Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence.O.I.C.G.S.X.
0.015e+034At5g23740832439RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)Encodes a putative ribosomal protein S11 (RPS11-beta).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.082e-1895Gma.5426.1.S1_atGlycine maxBI497927--3e-19At5g04460protein binding / zinc ion bindingO.I.C.G.S.X.
0.041e-1171Contig19803_atHordeum vulgareContig19803--6e-12At5g04460protein binding / zinc ion bindingO.I.C.G.S.X.
0.057e-1067Os09g0570500Oryza sativaAK069259.1-The start codon is not identified.2e-10At5g04460protein binding / zinc ion bindingO.I.C.G.S.X.
0.237e-34147PtpAffx.133890.1.A1_atPopulus trichocarpaCV257795hypothetical protein-2e-34At5g04460protein binding / zinc ion bindingO.I.C.G.S.X.
0.039e-550TaAffx.70088.1.S1_atTriticum aestivumBQ605972--5e-5At5g04460protein binding / zinc ion bindingO.I.C.G.S.X.
0.232e-301331619736_atVitis viniferaCF210461hypothetical protein LOC100241098-3e-30At5g04460protein binding / zinc ion bindingO.I.C.G.S.X.
0.012e+034Zm.18008.1.A1_atZea maysBG841554hypothetical protein LOC100192752-2e-2At1g5256026.5 kDa class I small heat shock protein-like (HSP26.5-P)O.I.C.G.S.X.



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