Homology analysis

Gene ID At5g03780
Gene name TRFL10 (TRF-LIKE 10)
Functional description Encodes a protein whose sequence is similar to human telomere proteins. This belongs to TRFL family 2, which do not show DNA binding in vitro.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.031e-242At5g16650831527DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.S.X.
0.024e-240At3g49850824147TRB3 (TELOMERE REPEAT BINDING FACTOR 3)Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.O.I.C.G.S.X.
0.012e-138At4g34740829626ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2)Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.O.I.C.G.S.X.
0.016e-136At5g60050836127PRLI-interacting factor-relatedF:protein binding;P:unknown;C:chloroplast;PMVOO.I.C.G.S.X.
0.016e-136At3g43590823456zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:unknown;C:unknown;VMOFPBO.I.C.G.S.X.
0.026e-136At3g43490823435zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;OPFMO.I.C.G.S.X.
0.026e-136At3g19200821454unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.032e-138Gma.12752.1.A1_atGlycine maxCD396493--4e-2At5g03780TRFL10 (TRF-LIKE 10)O.I.C.G.S.X.
0.023e-136rbaak19o02_s_atHordeum vulgarerbaak19o02--1e+0At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.S.X.
0.021e+036Os11g0262200Oryza sativa9639.m01448--4e-1At4g23960F-box family proteinO.I.C.G.S.X.
0.059e-136PtpAffx.24456.1.A1_atPopulus trichocarpaCV258985hypothetical protein-4e-1At5g03780TRFL10 (TRF-LIKE 10)O.I.C.G.S.X.
0.027e-136Ta.28873.1.S1_atTriticum aestivumCB307245--5e+0At3g46613RTFL4 (ROTUNDIFOLIA LIKE 4)O.I.C.G.S.X.
0.033e+0321616122_atVitis viniferaCF211952hypothetical protein LOC100260149-2e+0At5g03780TRFL10 (TRF-LIKE 10)O.I.C.G.S.X.
0.023e-136Zm.3530.2.S1_atZea maysAI881592Hypothetical protein LOC100192841-4e-50At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.C.G.S.X.



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