Homology analysis

Gene ID At5g02830
Gene name pentatricopeptide (PPR) repeat-containing protein
Functional description F:unknown;P:biological_process unknown;C:chloroplast;POMFBA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-242At2g34510818014-F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PBO.I.C.G.S.X.
0.018e-240At2g23460816878XLG1 (EXTRA-LARGE G-PROTEIN 1)encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.O.I.C.G.S.X.
0.013e-138At4g05220825870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.011e+036At5g65020836626ANNAT2 (Annexin Arabidopsis 2)Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.O.I.C.G.S.X.
0.011e+036At4g33450829482MYB69 (MYB DOMAIN PROTEIN 69)Member of the R2R3 factor gene family.O.I.C.G.S.X.
0.011e+036At3g23780821960NRPD2AThis gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.O.I.C.G.S.X.
0.011e+036At3g17570821023F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.S.X.
0.011e+036At2g38700818452MVD1 (MEVALONATE DIPHOSPHATE DECARBOXYLASE 1)Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer.O.I.C.G.S.X.
0.011e+036At1g28690839769pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.112e-22109GmaAffx.26602.1.S1_atGlycine maxBE611206--2e-23At5g02830pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.013e+034HW01N23u_atHordeum vulgareHW01N23u--2e-1At4g15830bindingO.I.C.G.S.X.
0.031e-244Os03g0284900Oryza sativaAK068146.1-Protein prenyltransferase domain containingprotein6e-3At5g02830pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.212e-28129PtpAffx.219739.1.S1_atPopulus trichocarpapmrna35763hypothetical protein-1e-28At5g02830pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.015e+034TaAffx.83051.1.S1_atTriticum aestivumCA662679--1e+0At1g10010AAP8O.I.C.G.S.X.
0.012e-2401607750_atVitis viniferaCB347759--2e-5At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.C.G.S.X.
0.011e-138Zm.989.1.A1_atZea maysAI396095hypothetical protein LOC100193648-1e-1At1g80950phospholipid/glycerol acyltransferase family proteinO.I.C.G.S.X.

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