Homology analysis

Gene ID At4g39870
Gene name -
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.014e-240At3g07900819981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.S.X.
0.034e-240At2g27250817267CLV3 (CLAVATA3)One of the three CLAVATA genes controlling the size of the shoot apical meristem (SAM) in Arabidopsis. Belongs to a large gene family called CLE for CLAVATA3/ESR-related. Encodes a stem cell-specific protein CLV3 presumed to be a precursor of a secreted peptide hormone. The deduced ORF encodes a 96-amino acid protein with an 18-amino acid N-terminal signal peptide. The functional form of CLV3 (MCLV3) is a posttranscriptionally modified 12-amino acid peptide, in which two of the three prolines were modified to hydroxyproline. CLV3 binds the ectodomain of the CLAVATA1 (CLV1) receptor-kinase. Regulates shoot and floral meristem development. Required for CLAVATA1 receptor-like kinase assembly into a signaling complex that includes KAPP and a Rho-related protein. It restricts its own domain of expression, the central zone (CZ) of the shoot apical meristem (SAM), by preventing differentiation of peripheral zone cells, which surround the CZ, into CZ cells and restricts overall SAM size by a separate, long-range effect on cell division rate. CLE domain of CLV3 is sufficient for function.O.I.C.G.S.X.
0.016e-136At4g08180826368ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C)F:phosphoinositide binding, oxysterol binding;P:steroid metabolic process, signal transduction;C:cellular_component unknown;MFOPBO.I.C.G.S.X.
0.016e-136At3g57880824957C2 domain-containing proteinF:molecular_function unknown;P:tryptophan biosynthetic process;C:endoplasmic reticulum, cell wall;MPOFO.I.C.G.S.X.
0.016e-136At2g03240814853-F:unknown;P:unknown;C:integral to membrane;MFPOO.I.C.G.S.X.
0.012e+034At5g53480835429importin beta-2, putativeF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, chloroplast, nuclear pore, cytoplasm;MFOPO.I.C.G.S.X.
0.012e+034At5g57050835809ABI2 (ABA INSENSITIVE 2)Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.075e-240Gma.12040.1.S1_a_atGlycine maxCA783276--2e-2At4g39870-O.I.C.G.S.X.
0.055e-342Contig17097_atHordeum vulgareContig17097--8e-3At4g39870-O.I.C.G.S.X.
0.021e+036OsAffx.25272.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.134e-963PtpAffx.63654.1.S1_atPopulus trichocarpaCV232034hypothetical protein-3e-9At4g39870-O.I.C.G.S.X.
0.036e-446Ta.6324.1.S1_atTriticum aestivumCA681095--8e-4At4g39870-O.I.C.G.S.X.
0.045e-5481609316_atVitis viniferaBQ795046hypothetical protein LOC100244322-1e-4At4g39870-O.I.C.G.S.X.
0.062e-240Zm.2673.1.S1_atZea maysCA401457TLD family protein-5e-2At4g39870-O.I.C.G.S.X.

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