Homology analysis

Gene ID At4g38680
Functional description Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.601e-46186At2g21060816641ATGRP2B (GLYCINE-RICH PROTEIN 2B)glycine-rich protein (AtGRP2b)O.I.C.G.S.X.
0.052e-550At4g31580829285SRZ-22Encodes a Serine/arginine-rich (SR) protein RSZp22. SR proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. RSZp22 is located in the nucleolus. It is a nucleocytoplasmic shuttling protein and an interacting partner to the Arabidopsis U1-70K.O.I.C.G.S.X.
0.118e-548At4g13850827019GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.O.I.C.G.S.X.
0.031e-344At3g16350820882myb family transcription factorF:transcription factor activity, DNA binding;P:in 7 processes;C:unknown;PMOBFVO.I.C.G.S.X.
0.015e-342At4g32920829429glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;BOMPFVAO.I.C.G.S.X.
0.012e-240At4g00060828214MEE44 (maternal effect embryo arrest 44)F:nucleotidyltransferase activity;P:embryonic development ending in seed dormancy;C:unknown;MOFPVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.225e-1065GmaAffx.65020.1.S1_atGlycine maxAW101190--4e-7At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.C.G.S.X.
0.122e-446Contig409_s_atHordeum vulgareContig409--3e-4At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.C.G.S.X.
0.122e-1067Os08g0129200Oryza sativaAK101577.1-Cold shock protein-11e-10At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.C.G.S.X.
0.074e-446PtpAffx.8675.1.S1_atPopulus trichocarpaCK097750hypothetical protein-5e-4At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.C.G.S.X.
0.143e-756TaAffx.128560.1.S1_atTriticum aestivumCA699137Cold shock domain protein 3-6e-7At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.C.G.S.X.
0.066e-3401619399_s_atVitis viniferaCB914618--1e-1At2g30560glycine-rich proteinO.I.C.G.S.X.
0.073e-238Zm.2157.8.S1_atZea maysBI096578Hypothetical protein LOC100193584-8e-1At3g66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.C.G.S.X.

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