Homology analysis

Gene ID At4g37940
Gene name AGL21
Functional description encodes a MADS box protein, highly expressed in the root.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.711e-87323At2g22630816794AGL17 (agamous-like 17)Encodes a MADs domain containing protein involved in promoting flowering. Loss of function mutations show delayed flowering in long days and reduced levels of LFY and AP1 expression.O.I.C.G.S.X.
0.186e-1581At3g57230824890AGL16 (AGAMOUS-LIKE 16)MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.O.I.C.G.S.X.
0.202e-1273At2g14210815907AGL44 (AGAMOUS-LIKE 44)MADS box gene, transcription factorO.I.C.G.S.X.
0.122e-963At3g57390824906AGL18encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.O.I.C.G.S.X.
0.136e-652At2g22540816787SVP (SHORT VEGETATIVE PHASE)Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.O.I.C.G.S.X.
0.072e-550At5g62165836337AGL42 (AGAMOUS LIKE 42)Encodes a MADS box transcription factor. Expressed in quiescent center.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.115e-756GmaAffx.76494.1.S1_atGlycine maxAW309024--7e-20At2g03710SEP4 (SEPALLATA 4)O.I.C.G.S.X.
0.044e-238Contig12483_atHordeum vulgareContig12483--2e-3At3g57390AGL18O.I.C.G.S.X.
0.162e-757Os04g0461300Oryza sativa9632.m03661-MADS-box transcription factor MADS23e-7At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.
0.153e-1169PtpAffx.201979.1.S1_atPopulus trichocarpapmrna3951hypothetical protein-3e-26At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.
0.072e-550TaAffx.143995.17.A1_atTriticum aestivumAY188331--1e-3At5g60910AGL8 (agamous-like 8)O.I.C.G.S.X.
0.117e-12691609046_atVitis viniferaCB971729hypothetical protein LOC100256085-1e-13At2g45650AGL6 (AGAMOUS-LIKE 6)O.I.C.G.S.X.
0.076e-444Zm.15206.1.A1_atZea maysBM268642--6e-18At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.C.G.S.X.

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