Homology analysis

Gene ID At4g36170
Gene name unknown protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-136At4g24200828521-F:unknown;P:unknown;C:mitochondrion;OBMFPO.I.C.G.S.X.
0.029e-134At3g13682820577LDL2 (LSD1-LIKE2)Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.O.I.C.G.S.X.
0.029e-134At3g44310823556NIT1Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.O.I.C.G.S.X.
0.019e-134At1g01040839574DCL1 (DICER-LIKE 1)Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.O.I.C.G.S.X.
0.024e+032At5g42260834231BGLU12 (BETA GLUCOSIDASE 12)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAO.I.C.G.S.X.
0.024e+032At5g07580830651DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.C.G.S.X.
0.014e+032At5g52630835340MEF1 (MITOCHONDRIAL RNA EDITING FACTOR 1)Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.023e-136PsAffx.C97000027_atGlycine maxPsAffx.C97000027--7e-1At3g57500unknown proteinO.I.C.G.S.X.
0.057e+030EBpi07_SQ002_D03_atHordeum vulgareEBpi07_SQ002_D03--3e-1At4g24974-O.I.C.G.S.X.
0.043e-550Os02g0328200Oryza sativaAK064617.1-Conserved hypothetical protein3e-5At4g36170unknown proteinO.I.C.G.S.X.
0.045e+032PtpAffx.50797.1.A1_atPopulus trichocarpaCV231798--8e-1At5g52780unknown proteinO.I.C.G.S.X.
0.032e+130TaAffx.57856.1.S1_atTriticum aestivumCA624496--3e+0At3g12820AtMYB10 (myb domain protein 10)O.I.C.G.S.X.
0.041e+0321620737_atVitis viniferaCB976283--2e+0At4g36170unknown proteinO.I.C.G.S.X.
0.046e+030ZmAffx.530.1.A1_atZea maysAI711707nuclear migration protein nudC-9e-16At5g53400nuclear movement family proteinO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage