Homology analysis

Gene ID At4g34100
Gene name protein binding / zinc ion binding
Functional description F:protein binding, zinc ion binding;P:unknown;C:chloroplast;MPOFV

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-346At5g44280834451RING1A (RING 1A)Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.O.I.C.G.S.X.
0.012e-346At3g25690822157CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1)actin binding protein required for normal chloroplast positioningO.I.C.G.S.X.
0.012e-346At2g33810817948SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It binds DNA, may directly regulate AP1, and is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.O.I.C.G.S.X.
0.012e-346At2g38300818410DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFO.I.C.G.S.X.
0.012e-346At1g73850843721structural constituent of ribosomeF:structural constituent of ribosome;P:translation;C:ribosome, intracellular;OMFPBVO.I.C.G.S.X.
0.017e-344At5g06910830582ATJ6 (Arabidopsis J-domain protein 6)DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain.O.I.C.G.S.X.
0.017e-344At4g08570826418heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMO.I.C.G.S.X.
0.017e-344At1g47340841137F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.085e-20101Gma.3249.1.S1_atGlycine maxBQ298433--9e-21At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.
0.096e-1479Contig6885_atHordeum vulgareContig6885--5e-14At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.
0.131e-863Os06g0639000Oryza sativaAK059723.1-Conserved hypothetical protein5e-9At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.
0.476e-106387PtpAffx.204681.1.S1_atPopulus trichocarpapmrna9216hypothetical protein-4e-106At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.
0.051e-759Ta.23286.1.S1_atTriticum aestivumCA656009--3e-8At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.
0.063e-8591607689_atVitis viniferaCF203350.1--3e-8At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.
0.081e-1171Zm.2007.1.A1_atZea maysAY105117.1--2e-11At4g34100protein binding / zinc ion bindingO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage