Homology analysis

Gene ID At4g33720
Gene name pathogenesis-related protein, putative
Functional description F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOB

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.177e-857At2g14580815945ATPRB1pathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.O.I.C.G.S.X.
0.173e-756At4g33710829513pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOO.I.C.G.S.X.
0.084e-652At4g25790828684allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBVAO.I.C.G.S.X.
0.171e-240At5g26130832682-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.S.X.
0.051e-240At4g25780828683pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.S.X.
0.036e-238At4g36930829847SPT (SPATULA)Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.O.I.C.G.S.X.
0.022e-136At3g21780821732UGT71B6 (UDP-glucosyl transferase 71B6)Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.O.I.C.G.S.X.
0.049e-134At5g383173771358LCR58 (Low-molecular-weight cysteine-rich 58)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.O.I.C.G.S.X.
0.019e-134At5g39550833951VIM3 (VARIANT IN METHYLATION 3)Encodes the VIM3/ORTH1 protein that is similar to VIM1. This protein has an N-terminal PHD domain and two RING domains surrounding an SRA domain. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. This protein functions as an E3 ubiquitin ligase in vitro with members of the UBC8 family E2s. Either of the two RING domains present in the protein can promote ubiquitylation in vitro, but, not the PHD domain. Over-expression of ORTH1/VIM3 leads to decreased levels of FWA methylation, increased levels of FWA transcripts, and delayed flowering. Cen180 repeats are also hypomethylated in plants overexpressing this protein.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.101e-344GmaAffx.42847.1.S1_s_atGlycine maxBU578388--5e-12At2g14580ATPRB1O.I.C.G.S.X.
0.065e-134Contig24957_atHordeum vulgareContig24957--1e-3At4g25790allergen V5/Tpx-1-related family proteinO.I.C.G.S.X.
0.042e+034Os02g0786500Oryza sativaAK107467.1-Pathogenesis-related protein 1 precursor (PR-1)2e-3At4g25790allergen V5/Tpx-1-related family proteinO.I.C.G.S.X.
0.061e+034PtpAffx.214404.1.S1_atPopulus trichocarpapmrna28019hypothetical protein-3e-6At3g19690pathogenesis-related protein, putativeO.I.C.G.S.X.
0.061e+034Ta.19101.1.S1_atTriticum aestivumCA647221--1e-3At4g25790allergen V5/Tpx-1-related family proteinO.I.C.G.S.X.
0.091e-3421612826_atVitis viniferaAJ536326.1--4e-3At4g33720pathogenesis-related protein, putativeO.I.C.G.S.X.
0.042e+032Zm.9845.1.S1_atZea maysBM379918hypothetical protein LOC100272820-6e-3At4g33730pathogenesis-related protein, putativeO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage