Homology analysis

Gene ID At4g33160
Gene name ubiquitin-protein ligase
Functional description F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;P

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.011e-242At3g01560821110proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBVAO.I.C.G.S.X.
0.024e-240At5g62190836340PRH75DEAD/DEAH box RNA helicase PRH75O.I.C.G.S.X.
0.014e-240At5g65700836699BAM1 (BARELY ANY MERISTEM 1)Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.O.I.C.G.S.X.
0.024e-240At4g33690829511unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPO.I.C.G.S.X.
0.024e-240At4g40060830169ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.O.I.C.G.S.X.
0.014e-240At3g18710821402PUB29 (PLANT U-BOX 29)Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.O.I.C.G.S.X.
0.014e-240At3g54930824658serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeF:protein phosphatase type 2A regulator activity;P:signal transduction;C:chloroplast, protein phosphatase type 2A complex;MPOFO.I.C.G.S.X.
0.024e-240At2g32360817797ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MOFPVBAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.021e+036GmaAffx.55607.1.S1_atGlycine maxBM567859--8e-1At2g28420lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.C.G.S.X.
0.025e+032Contig23275_atHordeum vulgareContig23275--3e-5At3g149904-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putativeO.I.C.G.S.X.
0.011e+036Os07g0606900Oryza sativaCA756340-Heavy metal transport/detoxification proteindomain containing protein5e+0At5g25940early nodulin-relatedO.I.C.G.S.X.
0.029e-136PtpAffx.221656.1.S1_atPopulus trichocarpapmrna38651hypothetical protein-3e-4At3g17950unknown proteinO.I.C.G.S.X.
0.023e+034TaAffx.60679.1.S1_atTriticum aestivumCA484429--4e+0At4g00880auxin-responsive family proteinO.I.C.G.S.X.
0.022e-1361607964_s_atVitis viniferaBM437259hypothetical protein LOC100257686-4e-1At5g08410FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)O.I.C.G.S.X.
0.021e+034Zm.2963.1.A1_atZea maysBG842411naringenin,2-oxoglutarate 3-dioxygenase-6e+0At2g14247Expressed proteinO.I.C.G.S.X.

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