Homology analysis

Gene ID At4g29000
Gene name tesmin/TSO1-like CXC domain-containing protein
Functional description F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;OMPF

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.426e-147521At2g20110816530tesmin/TSO1-like CXC domain-containing proteinF:transcription factor activity;P:unknown;C:cellular_component unknown;OMPFBVO.I.C.G.S.X.
0.104e-1273At5g25790832648transcription factorF:transcription factor activity;P:unknown;C:cellular_component unknown;OMPBO.I.C.G.S.X.
0.011e-346At1g43850840981SEU (seuss)Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.O.I.C.G.S.X.
0.021e-242At5g66350836767SHI (SHORT INTERNODES)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.O.I.C.G.S.X.
0.026e-240At3g26790822293FUS3 (FUSCA 3)Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.O.I.C.G.S.X.
0.012e-138At4g34260829575FUC95AF:1,2-alpha-L-fucosidase activity;P:biological_process unknown;C:endomembrane system;BFOPO.I.C.G.S.X.
0.012e-138At3g19130821447ATRBP47B (RNA-binding protein 47B)F:RNA binding;P:unknown;C:unknown;MOPFBAVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.253e-32141GmaAffx.74995.1.S1_atGlycine maxBM086265--1e-32At4g29000tesmin/TSO1-like CXC domain-containing proteinO.I.C.G.S.X.
0.023e-240HVSMEm0021J24r2_s_atHordeum vulgareHVSMEm0021J24r2--5e+0At5g64820unknown proteinO.I.C.G.S.X.
0.108e-1273Os.26583.1.A1_atOryza sativa---0O.I.C.G.S.X.
0.222e-24115PtpAffx.216985.1.S1_atPopulus trichocarpapmrna32077hypothetical protein-1e-24At4g29000tesmin/TSO1-like CXC domain-containing proteinO.I.C.G.S.X.
0.095e-27123TaAffx.9387.1.S1_atTriticum aestivumBJ216452--2e-8At5g25790transcription factorO.I.C.G.S.X.
0.023e-1361612008_atVitis viniferaCF604996hypothetical protein LOC100243222-1e+0At4g08790nitrilase, putativeO.I.C.G.S.X.
0.023e-240Zm.19317.1.S1_atZea maysCO521190tesmin/TSO1-like CXC domain containing protein-5e-2At4g29000tesmin/TSO1-like CXC domain-containing proteinO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage