Homology analysis

Gene ID At4g25530
Gene name FWA
Functional description Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.017e-240At4g21750828263ATML1 (MERISTEM LAYER 1)Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.O.I.C.G.S.X.
0.017e-240At4g14350827078protein kinase family proteinF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol, nucleus, plasma membrane, phragmoplast, cytoplasm;MOPFBVAO.I.C.G.S.X.
0.033e-138At4g00730828022ANL2 (ANTHOCYANINLESS 2)Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root developmentO.I.C.G.S.X.
0.011e+036At5g18710831989unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.011e+036At4g33780829520-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.S.X.
0.011e+036At3g25830822177ATTPS-CIN (terpene synthase-like sequence-1,8-cineole)Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.014e-138Gma.8835.1.A1_atGlycine maxAW349898--6e+0At5g01520zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.015e-136bags30h06_atHordeum vulgarebags30h06--3e-10At2g24280serine carboxypeptidase S28 family proteinO.I.C.G.S.X.
0.015e-138Os08g0379500Oryza sativa9636.m02891--5e-2At4g33660unknown proteinO.I.C.G.S.X.
0.042e-552PtpAffx.120252.1.S1_s_atPopulus trichocarpaCX171411hypothetical protein-6e-6At4g00730ANL2 (ANTHOCYANINLESS 2)O.I.C.G.S.X.
0.011e+036TaAffx.4531.2.S1_s_atTriticum aestivumCA643740--1e-6At1g22882-O.I.C.G.S.X.
0.011e+0341616789_atVitis viniferaCF201110.1--2e-15At5g50870UBC27 (ubiquitin-conjugating enzyme 27)O.I.C.G.S.X.
0.017e+032Zm.5347.1.A1_atZea maysCO522616--1e+0At1g65720unknown proteinO.I.C.G.S.X.

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