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| Gene ID | At4g25490 |
| Gene name | CBF1 (C-REPEAT/DRE BINDING FACTOR 1) |
| Functional description | Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.85 | 6e-163 | 573 | At4g25470 | 828651 | CBF2 (C-REPEAT/DRE BINDING FACTOR 2) | Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway. | O.I. | C.G. | S.X. | |
| 0.77 | 1e-142 | 506 | At4g25480 | 828652 | DREB1A (DEHYDRATION RESPONSE ELEMENT B1A) | encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid. | O.I. | C.G. | S.X. | |
| 0.38 | 3e-32 | 139 | At5g51990 | 835274 | CBF4 (C- REPEAT-BINDING FACTOR 4) | encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF4). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to drought stress and abscisic acid treatment, but not to low temperature. | O.I. | C.G. | S.X. | |
| 0.08 | 6e-9 | 61 | At3g16280 | 820874 | DNA binding / transcription factor | encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. | O.I. | C.G. | S.X. | |
| 0.07 | 1e-6 | 54 | At2g44940 | 819103 | AP2 domain-containing transcription factor TINY, putative | encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. | O.I. | C.G. | S.X. | |
| 0.12 | 5e-6 | 52 | At2g35700 | 818139 | ERF38 (ERF FAMILY PROTEIN 38) | encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism. | O.I. | C.G. | S.X. | |
| 0.15 | 8e-5 | 48 | At1g12610 | 837817 | DDF1 (DWARF AND DELAYED FLOWERING 1) | Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. | O.I. | C.G. | S.X. | |
| 0.06 | 5e-3 | 42 | At2g25820 | 817124 | transcription factor | encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. | O.I. | C.G. | S.X. | |
| 0.02 | 2e-2 | 40 | At5g53290 | 835410 | CRF3 (CYTOKININ RESPONSE FACTOR 3) | encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.09 | 3e-8 | 59 | GmaAffx.2501.2.S1_at | Glycine max | AW308782 | CBF-like protein | - | 6e-5 | At4g25480 | DREB1A (DEHYDRATION RESPONSE ELEMENT B1A) | O.I. | C.G. | S.X. | |
| 0.03 | 2e+0 | 32 | HV_CEb0007B08r2_x_at | Hordeum vulgare | HV_CEb0007B08r2 | - | - | 3e+0 | At4g00585 | unknown protein | O.I. | C.G. | S.X. | |
| 0.09 | 2e-1 | 38 | Os02g0677300 | Oryza sativa | AK106041.1 | - | CRT/DRE binding factor 1 | 4e-2 | At1g15360 | SHN1 (SHINE 1) | O.I. | C.G. | S.X. | |
| 0.08 | 1e-1 | 38 | PtpAffx.147430.1.A1_at | Populus trichocarpa | CV237810 | AP2/ERF domain-containing transcription factor | - | 7e-2 | At4g25490 | CBF1 (C-REPEAT/DRE BINDING FACTOR 1) | O.I. | C.G. | S.X. | |
| 0.06 | 8e-2 | 38 | Ta.25843.1.A1_at | Triticum aestivum | CD453611 | CBFIVc-B14 | - | 1e-1 | At4g25490 | CBF1 (C-REPEAT/DRE BINDING FACTOR 1) | O.I. | C.G. | S.X. | |
| 0.03 | 2e+0 | 32 | 1622205_at | Vitis vinifera | BQ798776 | - | - | 3e-7 | At4g00430 | PIP1 | O.I. | C.G. | S.X. | |
| 0.04 | 5e-1 | 34 | Zm.9418.1.S1_at | Zea mays | AF493799.1 | DREB-like protein | - | 4e-2 | At2g35700 | ERF38 (ERF FAMILY PROTEIN 38) | O.I. | C.G. | S.X. |
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