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| Gene ID | At4g25350 |
| Gene name | SHB1 (SHORT HYPOCOTYL UNDER BLUE1) |
| Functional description | SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.40 | 2e-30 | 135 | At1g35350 | 840424 | - | F:unknown;P:unknown;C:integral to membrane;FMPOB | O.I. | C.G. | S.X. | |
| 0.47 | 6e-27 | 123 | At1g26730 | 839214 | EXS family protein / ERD1/XPR1/SYG1 family protein | F:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOB | O.I. | C.G. | S.X. | |
| 0.10 | 2e-17 | 91 | At2g03240 | 814853 | - | F:unknown;P:unknown;C:integral to membrane;MFPO | O.I. | C.G. | S.X. | |
| 0.11 | 8e-14 | 79 | At1g14040 | 837965 | - | F:unknown;P:unknown;C:integral to membrane;FMPO | O.I. | C.G. | S.X. | |
| 0.02 | 3e-10 | 67 | At3g29060 | 822550 | - | F:unknown;P:unknown;C:integral to membrane;MFPOVBA | O.I. | C.G. | S.X. | |
| 0.07 | 1e-9 | 65 | At2g03250 | 814854 | EXS family protein / ERD1/XPR1/SYG1 family protein | F:unknown;P:unknown;C:integral to membrane;MFPOB | O.I. | C.G. | S.X. | |
| 0.11 | 5e-6 | 54 | At2g03260 | 814855 | EXS family protein / ERD1/XPR1/SYG1 family protein | F:unknown;P:unknown;C:integral to membrane;FMPO | O.I. | C.G. | S.X. | |
| 0.05 | 5e-3 | 44 | At1g69480 | 843280 | EXS family protein / ERD1/XPR1/SYG1 family protein | F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB | O.I. | C.G. | S.X. | |
| 0.01 | 3e-1 | 38 | At5g58740 | 835988 | nuclear movement family protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPF | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.03 | 2e-6 | 56 | GmaAffx.77909.1.S1_at | Glycine max | BG882051 | - | - | 9e-11 | At1g26730 | EXS family protein / ERD1/XPR1/SYG1 family protein | O.I. | C.G. | S.X. | |
| 0.01 | 2e+0 | 34 | HS18J23u_s_at | Hordeum vulgare | HS18J23u | - | - | 3e-1 | At5g56600 | PRF3 (PROFILIN 3) | O.I. | C.G. | S.X. | |
| 0.01 | 2e-6 | 56 | Os02g0809800 | Oryza sativa | AK063181.1 | - | - | 5e-1 | At2g34140 | Dof-type zinc finger domain-containing protein | O.I. | C.G. | S.X. | |
| 0.20 | 2e-21 | 105 | PtpAffx.207872.1.S1_at | Populus trichocarpa | pmrna15627 | pho1-like protein | - | 9e-17 | At1g14040 | - | O.I. | C.G. | S.X. | |
| 0.01 | 3e-1 | 38 | TaAffx.26217.1.S1_at | Triticum aestivum | CA690962 | - | - | 9e+0 | At1g47655 | Dof-type zinc finger domain-containing protein | O.I. | C.G. | S.X. | |
| 0.02 | 3e-1 | 36 | 1611746_at | Vitis vinifera | CB344554 | hypothetical protein LOC100266405 | - | 1e-1 | At4g02080 | ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2) | O.I. | C.G. | S.X. | |
| 0.03 | 1e-7 | 57 | Zm.11798.1.A1_at | Zea mays | BM380830 | - | - | 1e-6 | At3g23430 | PHO1 (phosphate 1) | O.I. | C.G. | S.X. |
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