Homology analysis

Gene ID At4g25350
Gene name SHB1 (SHORT HYPOCOTYL UNDER BLUE1)
Functional description SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.402e-30135At1g35350840424-F:unknown;P:unknown;C:integral to membrane;FMPOBO.I.C.G.S.X.
0.476e-27123At1g26730839214EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOBO.I.C.G.S.X.
0.102e-1791At2g03240814853-F:unknown;P:unknown;C:integral to membrane;MFPOO.I.C.G.S.X.
0.118e-1479At1g14040837965-F:unknown;P:unknown;C:integral to membrane;FMPOO.I.C.G.S.X.
0.023e-1067At3g29060822550-F:unknown;P:unknown;C:integral to membrane;MFPOVBAO.I.C.G.S.X.
0.071e-965At2g03250814854EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane;MFPOBO.I.C.G.S.X.
0.115e-654At2g03260814855EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane;FMPOO.I.C.G.S.X.
0.055e-344At1g69480843280EXS family protein / ERD1/XPR1/SYG1 family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOBO.I.C.G.S.X.
0.013e-138At5g58740835988nuclear movement family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.032e-656GmaAffx.77909.1.S1_atGlycine maxBG882051--9e-11At1g26730EXS family protein / ERD1/XPR1/SYG1 family proteinO.I.C.G.S.X.
0.012e+034HS18J23u_s_atHordeum vulgareHS18J23u--3e-1At5g56600PRF3 (PROFILIN 3)O.I.C.G.S.X.
0.012e-656Os02g0809800Oryza sativaAK063181.1--5e-1At2g34140Dof-type zinc finger domain-containing proteinO.I.C.G.S.X.
0.202e-21105PtpAffx.207872.1.S1_atPopulus trichocarpapmrna15627pho1-like protein-9e-17At1g14040-O.I.C.G.S.X.
0.013e-138TaAffx.26217.1.S1_atTriticum aestivumCA690962--9e+0At1g47655Dof-type zinc finger domain-containing proteinO.I.C.G.S.X.
0.023e-1361611746_atVitis viniferaCB344554hypothetical protein LOC100266405-1e-1At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)O.I.C.G.S.X.
0.031e-757Zm.11798.1.A1_atZea maysBM380830--1e-6At3g23430PHO1 (phosphate 1)O.I.C.G.S.X.



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