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| Gene ID | At4g24190 |
| Gene name | SHD (SHEPHERD) |
| Functional description | encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.04 | 3e-7 | 57 | At5g52640 | 835341 | ATHSP90.1 (HEAT SHOCK PROTEIN 90.1) | Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | O.I. | C.G. | S.X. | |
| 0.01 | 1e-3 | 46 | At2g04030 | 814930 | CR88 | Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | O.I. | C.G. | S.X. | |
| 0.04 | 8e-2 | 40 | At5g56010 | 835699 | HSP81-3 | a member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. | O.I. | C.G. | S.X. | |
| 0.01 | 8e-2 | 40 | At5g56000 | 835698 | heat shock protein 81-4 (HSP81-4) | F:unfolded protein binding, ATP binding;P:protein folding;C:cytosol, apoplast, cell wall, nucleus, plasma membrane;OMBFPAV | O.I. | C.G. | S.X. | |
| 0.01 | 8e-2 | 40 | At5g46100 | 834651 | pentatricopeptide (PPR) repeat-containing protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA | O.I. | C.G. | S.X. | |
| 0.01 | 3e-1 | 38 | At5g26860 | 832744 | LON1 (LON PROTEASE 1) | Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. | O.I. | C.G. | S.X. | |
| 0.01 | 3e-1 | 38 | At5g37320 | 833706 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.47 | 5e-56 | 220 | Gma.18032.1.S1_at | Glycine max | BG650211 | - | - | 3e-56 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. | |
| 0.42 | 9e-68 | 258 | Contig91_at | Hordeum vulgare | Contig91 | - | - | 2e-67 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. | |
| 0.38 | 3e-67 | 258 | Os06g0716700 | Oryza sativa | AK063385.1 | - | Endoplasmin homolog precursor (GRP94 homolog) | 2e-67 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. | |
| 0.36 | 6e-96 | 353 | PtpAffx.98826.1.S1_s_at | Populus trichocarpa | CX653746 | hypothetical protein | - | 2e-96 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. | |
| 0.41 | 4e-50 | 200 | Ta.28735.1.S1_a_at | Triticum aestivum | BJ250459 | - | - | 5e-50 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. | |
| 0.24 | 4e-75 | 282 | 1610896_at | Vitis vinifera | CF204993.1 | hypothetical protein LOC100267648 | - | 4e-75 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. | |
| 0.41 | 1e-57 | 224 | Zm.5048.3.S1_x_at | Zea mays | AY103537.1 | hypothetical protein LOC100279926 | - | 3e-57 | At4g24190 | SHD (SHEPHERD) | O.I. | C.G. | S.X. |
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