CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At4g23820

Gene name glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein

Functional description F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.28	2e-22	107	At5g41870	834192	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.03	1e-5	52	At3g62110	825384	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:response to cyclopentenone, carbohydrate metabolic process;C:vacuole;FPBOMAV	O.I.	C.G.	S.X.
0.06	4e-5	50	At3g48950	824056	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.04	7e-4	46	At4g33440	829481	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	S.X.
0.05	7e-4	46	At1g19170	838500	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:mitochondrion;FPBOMA	O.I.	C.G.	S.X.
0.04	1e-2	42	At3g16850	820938	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:vacuole, plant-type cell wall;PBFOMA	O.I.	C.G.	S.X.
0.02	2e-1	38	At4g17940	827519	binding	F:binding;P:biological_process unknown;C:unknown;PBOMA	O.I.	C.G.	S.X.
0.01	7e-1	36	At4g18670	827601	protein binding / structural constituent of cell wall	F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBPFOVA	O.I.	C.G.	S.X.
0.03	7e-1	36	At3g42950	823351	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.08	1e-2	42	Gma.7587.1.S1_at	Glycine max	CD392205	-	-	2e-15	At5g41870	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.11	4e-13	75	Contig12893_at	Hordeum vulgare	Contig12893	-	-	9e-13	At4g23820	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.11	3e-23	111	Os01g0618900	Oryza sativa	AK058453.1	-	Glycoside hydrolase, family 28 protein	2e-23	At4g23820	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.32	2e-38	161	PtpAffx.5923.1.S1_at	Populus trichocarpa	CV229264	hypothetical protein	-	2e-38	At4g23820	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.11	2e-16	87	TaAffx.85286.1.S1_at	Triticum aestivum	CA624020	-	-	8e-17	At4g23820	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.07	9e-16	83	1621225_at	Vitis vinifera	CB974537	hypothetical LOC100250089	-	1e-15	At4g23820	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.11	4e-19	95	Zm.7001.1.A1_at	Zea mays	CO526482	hypothetical protein LOC100273574	-	1e-18	At4g23820	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.

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