Homology analysis

Gene ID At4g23570
Gene name SGT1A
Functional description Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.702e-102373At4g11260826728SGT1BFunctions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.O.I.C.G.S.X.
0.023e-240At3g14710820699F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.
0.023e-240At2g28660817415copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:chloroplast;OPMBFO.I.C.G.S.X.
0.021e-138At5g52710835348heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVAO.I.C.G.S.X.
0.025e-136At5g64813836603LIP1 (Light Insensitive Period1)The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.O.I.C.G.S.X.
0.015e-136At4g29750829097RNA bindingF:RNA binding;P:unknown;C:chloroplast;PMOFAO.I.C.G.S.X.
0.015e-136At4g25835828689AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.145e-550GmaAffx.90218.1.S1_atGlycine maxCF805943SGT1-2-7e-12At4g11260SGT1BO.I.C.G.S.X.
0.082e-550Contig4511_atHordeum vulgareContig4511SGT1 protein-1e-11At4g11260SGT1BO.I.C.G.S.X.
0.087e-859Os01g0624500Oryza sativaAF192467.1-Sgt15e-14At4g11260SGT1BO.I.C.G.S.X.
0.231e-1171PtpAffx.18719.1.S1_atPopulus trichocarpaCV245097hypothetical protein-1e-11At4g23570SGT1AO.I.C.G.S.X.
0.124e-859Ta.2286.1.S1_atTriticum aestivumBJ308253SGT1-1 protein-6e-8At4g23570SGT1AO.I.C.G.S.X.
0.077e-16831620695_atVitis viniferaCF204841.1--3e-20At4g11260SGT1BO.I.C.G.S.X.
0.162e-756Zm.5791.1.A1_atZea maysAY103953.1suppressor of G2 allele of SKP1-9e-7At4g23570SGT1AO.I.C.G.S.X.



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