Homology analysis

Gene ID At4g21600
Gene name ENDO5 (endonuclease 5)
Functional description Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.820702At4g21585828244ENDO4 (endonuclease 4)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.O.I.C.G.S.X.
0.788e-157553At4g21590828245ENDO3 (endonuclease 3)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.O.I.C.G.S.X.
0.042e-344At1g11190837660BFN1 (BIFUNCTIONAL NUCLEASE I)Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).O.I.C.G.S.X.
0.014e-136At4g02560827904LD (luminidependens)Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants.O.I.C.G.S.X.
0.022e+034At4g23890828489unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMFO.I.C.G.S.X.
0.012e+034At3g07660819957unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.S.X.
0.012e+034At2g13560815842malate oxidoreductase, putativeF:oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity, ATP binding;P:response to salt stress, malate metabolic process;C:mitochondrion, chloroplast;BOMPFAO.I.C.G.S.X.
0.012e+034At2g02090814740ETL1F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:chloroplast;BMOFPVAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.174e-1169GmaAffx.21948.1.S1_atGlycine maxAW704894--2e-11At4g21600ENDO5 (endonuclease 5)O.I.C.G.S.X.
0.033e+032Contig6590_atHordeum vulgareContig6590--8e-3At1g21410SKP2AO.I.C.G.S.X.
0.012e-138Os12g0228400Oryza sativaAK120234.1-Chaperonin CPN60-1, mitochondrial precursor(HSP60-1)3e-2At3g23990HSP60 (HEAT SHOCK PROTEIN 60)O.I.C.G.S.X.
0.137e-1375PtpAffx.209714.1.S1_atPopulus trichocarpapmrna19175hypothetical protein-9e-13At4g21600ENDO5 (endonuclease 5)O.I.C.G.S.X.
0.022e+034TaAffx.92983.1.S1_atTriticum aestivumBJ237288--1e-46Atmg00580-O.I.C.G.S.X.
0.112e-9611612965_atVitis viniferaCF518997hypothetical protein LOC100265776-3e-19At4g21585ENDO4 (endonuclease 4)O.I.C.G.S.X.
0.033e+032Zm.9917.1.A1_atZea maysBM331863ribosomal protein L32 containing protein-1e+0At1g69485structural constituent of ribosomeO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage