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| Gene ID | At4g17090 |
| Gene name | CT-BMY (CHLOROPLAST BETA-AMYLASE) |
| Functional description | Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected). |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.01 | 9e-4 | 46 | At2g45880 | 819196 | BAM7 (BETA-AMYLASE 7) | F:cation binding, beta-amylase activity, catalytic activity;P:cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process;C:cellular_component unknown;PBOF | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At5g18670 | 831985 | BMY3 | putative beta-amylase BMY3 (BMY3) | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At3g13450 | 820547 | DIN4 (DARK INDUCIBLE 4) | branched chain alpha-keto acid dehydrogenase E1 beta | O.I. | C.G. | S.X. | |
| 0.06 | 2e-1 | 38 | At3g23920 | 821975 | BAM1 (BETA-AMYLASE 1) | Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3. | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At2g36490 | 818224 | DML1 (DEMETER-LIKE 1) | A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts. | O.I. | C.G. | S.X. | |
| 0.01 | 2e-1 | 38 | At2g41290 | 818728 | strictosidine synthase family protein | F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;PMBOFA | O.I. | C.G. | S.X. | |
| 0.01 | 8e-1 | 36 | At4g23950 | 828495 | - | F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane;OMFBP | O.I. | C.G. | S.X. | |
| 0.01 | 8e-1 | 36 | At4g32420 | 829377 | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:unknown;MOBFPVA | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.37 | 2e-20 | 101 | Gma.16670.1.S1_at | Glycine max | AW350266 | beta-amylase | - | 2e-20 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. | |
| 0.10 | 1e-7 | 57 | Contig8246_at | Hordeum vulgare | Contig8246 | - | - | 2e-7 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. | |
| 0.08 | 5e-10 | 67 | Os03g0141200 | Oryza sativa | AK068968.1 | - | Glycoside hydrolase, family 14B, plant protein | 3e-10 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. | |
| 0.49 | 2e-73 | 278 | Ptp.5279.1.S1_at | Populus trichocarpa | BU808930 | hypothetical protein | - | 9e-74 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. | |
| 0.09 | 2e-7 | 57 | Ta.4494.1.S1_x_at | Triticum aestivum | BE516748 | - | - | 2e-7 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. | |
| 0.44 | 2e-51 | 202 | 1616107_s_at | Vitis vinifera | CB340793 | hypothetical protein LOC100247246 | - | 5e-51 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. | |
| 0.06 | 9e-2 | 38 | Zm.3883.1.S1_at | Zea mays | AY105500.1 | beta-amylase | - | 2e-1 | At4g17090 | CT-BMY (CHLOROPLAST BETA-AMYLASE) | O.I. | C.G. | S.X. |
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