Homology analysis

Gene ID At4g15093
Gene name catalytic LigB subunit of aromatic ring-opening dioxygenase family
Functional description F:electron carrier activity, oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;P:oxidation reduction, cellular aromatic compound metabolic process;C:cellular_component unknown;BFOPAM

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.011e-138At4g34430829594CHB3Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002).O.I.C.G.S.X.
0.021e-138At4g12730826885FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cdsO.I.C.G.S.X.
0.011e-138At3g19050821439POK2 (PHRAGMOPLAST ORIENTING KINESIN 2)PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.O.I.C.G.S.X.
0.014e-136At3g15095820740unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMBFPVAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.398e-25115GmaAffx.90970.1.S1_s_atGlycine maxCF806695--5e-25At4g15093catalytic LigB subunit of aromatic ring-opening dioxygenase familyO.I.C.G.S.X.
0.038e-134Contig10630_atHordeum vulgareContig10630--6e-6At3g09090DEX1 (DEFECTIVE IN EXINE FORMATION 1)O.I.C.G.S.X.
0.022e-138Os11g0599500Oryza sativa9639.m03514-DEAD-box protein 3, Y-chromosomal4e-40At3g58570DEAD box RNA helicase, putativeO.I.C.G.S.X.
0.061e-138PtpAffx.7925.1.S1_atPopulus trichocarpaCA927130hypothetical protein-1e-1At4g15093catalytic LigB subunit of aromatic ring-opening dioxygenase familyO.I.C.G.S.X.
0.047e+032TaAffx.7361.1.S1_atTriticum aestivumCA661069--9e-1At4g15470-O.I.C.G.S.X.
0.078e-6501622368_atVitis viniferaCF513314hypothetical protein LOC100244355-4e-5At4g15093catalytic LigB subunit of aromatic ring-opening dioxygenase familyO.I.C.G.S.X.
0.031e+130ZmAffx.326.1.A1_atZea maysAI670508--8e-1At2g26860F-box family proteinO.I.C.G.S.X.



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