Homology analysis

Gene ID At4g13850
Functional description Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.126e-548At4g13860827020glycine-rich RNA-binding protein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBAO.I.C.G.S.X.
0.086e-548At2g21660816705CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.109e-1167Gma.5864.1.S1_atGlycine maxBF067737--1e-10At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.C.G.S.X.
0.052e+032Contig3041_atHordeum vulgareContig3041--5e-1At3g52380CP33O.I.C.G.S.X.
0.023e-240Os.20211.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.051e+034PtpAffx.43476.1.A1_atPopulus trichocarpaCV269947--3e-1At5g5025031 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putativeO.I.C.G.S.X.
0.046e-238Ta.17106.1.S1_atTriticum aestivumCA617898--7e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.C.G.S.X.
0.062e-2381611866_atVitis viniferaCF513347hypothetical protein LOC100246501-6e-12At3g53460CP29O.I.C.G.S.X.
0.044e-134ZmAffx.813.1.A1_atZea maysAI770422--2e-1At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.C.G.S.X.

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