Homology analysis

Gene ID At4g09960
Functional description a MADS box transcription factor expressed in the carpel and ovules

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.255e-28125At3g58780825047SHP1 (SHATTERPROOF 1)One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.O.I.C.G.S.X.
0.131e-1377At4g22950828394AGL19 (AGAMOUS-LIKE 19)MADS-box protein AGL19O.I.C.G.S.X.
0.202e-1273At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.S.X.
0.132e-1273At2g45650819173AGL6 (AGAMOUS-LIKE 6)sequence suggests this encodes a MADS-box transcription factorO.I.C.G.S.X.
0.236e-1271At2g42830818883SHP2 (SHATTERPROOF 2)AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.278e-43174Gma.6760.1.S1_atGlycine maxBU544178--1e-42At4g09960STK (SEEDSTICK)O.I.C.G.S.X.
0.043e+032HO10P07S_atHordeum vulgareHO10P07S--3e-2At2g16505-O.I.C.G.S.X.
0.134e-550Os01g0201700Oryza sativaAY553724.1-MADS box protein2e-10At4g18960AG (AGAMOUS)O.I.C.G.S.X.
0.374e-23109PtpAffx.43839.1.S1_atPopulus trichocarpaDN501305hypothetical protein-3e-23At4g09960STK (SEEDSTICK)O.I.C.G.S.X.
0.034e-136TaAffx.37583.1.A1_atTriticum aestivumBJ272621--3e-1At5g16250unknown proteinO.I.C.G.S.X.
0.215e-10631621836_atVitis viniferaAF373604.1MADS-box protein 5-2e-9At4g09960STK (SEEDSTICK)O.I.C.G.S.X.
0.061e-136Zm.14825.1.A1_atZea maysAJ430639.1m25 protein-5e-1At4g09960STK (SEEDSTICK)O.I.C.G.S.X.

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