Homology analysis

Gene ID At4g01970
Gene name AtSTS (Arabidopsis thaliana stachyose synthase)
Functional description Encodes a putative stachyose synthetase.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.072e-861At5g40390834037SIP1 (seed imbibition 1-like)Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged.O.I.C.G.S.X.
0.022e-552At4g01265828082raffinose synthase family protein / seed imbibition protein-relatedPseudogene of AT4G01265; raffinose synthase family proteinO.I.C.G.S.X.
0.022e-552At1g55740842023AtSIP1 (Arabidopsis thaliana seed imbibition 1)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:unknown;C:cellular_component unknown;PFBAOO.I.C.G.S.X.
0.018e-240At5g07830830676AtGUS2 (Arabidopsis thaliana glucuronidase 2)Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.O.I.C.G.S.X.
0.013e-138At5g39820833978anac094 (Arabidopsis NAC domain containing protein 94)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMO.I.C.G.S.X.
0.013e-138At5g59920836114ULI3Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.O.I.C.G.S.X.
0.013e-138At5g60160836138aspartyl aminopeptidase, putativeF:aminopeptidase activity, zinc ion binding;P:response to cadmium ion, proteolysis;C:plasma membrane, vacuole;BOFMPAO.I.C.G.S.X.
0.013e-138At1g58200842187MSL3 (MscS-LIKE 3)A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.201e-29133GmaAffx.14279.1.S1_atGlycine maxBM887020--2e-30At4g01970AtSTS (Arabidopsis thaliana stachyose synthase)O.I.C.G.S.X.
0.013e+034Contig12481_atHordeum vulgareContig12481--1e+0At2g10535LCR29 (Low-molecular-weight cysteine-rich 29)O.I.C.G.S.X.
0.023e-346Os08g0495800Oryza sativaAK067229.1-Raffinose synthase family protein3e-26At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)O.I.C.G.S.X.
0.153e-1171PtpAffx.211708.1.S1_atPopulus trichocarpapmrna22945hypothetical protein-2e-11At4g01970AtSTS (Arabidopsis thaliana stachyose synthase)O.I.C.G.S.X.
0.011e+036TaAffx.108373.2.S1_atTriticum aestivumCA683186--4e+0At5g62020AT-HSFB2AO.I.C.G.S.X.
0.024e-4461608995_atVitis viniferaBQ796616hypothetical protein LOC100248608-2e-92At3g57520AtSIP2 (Arabidopsis thaliana seed imbibition 2)O.I.C.G.S.X.
0.011e-138Zm.17210.1.A1_atZea maysCF035651dnaJ-2e-4At1g61770DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.S.X.

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