Homology analysis

Gene ID At4g01750
Gene name RGXT2 (rhamnogalacturonan xylosyltransferase 2)
Functional description Encodes a protein with UDP-xylose-dependent xylosyltransferase activity, which transfers Xyl onto L-fucose and (albeit less efficiently) L-arabinose. The linkage to L-fucose was shown to be preferentially to the O-4 position. Analysis of mutant containing T-DNA insertion in this gene indicate that the RGXT2 protein might be involved in the synthesis of the α-D-Xyl-(1,3)-α-L-Fuc-(1,4)-L-Rha structure in pectic rhamnogalacturonan II.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.8501342At4g01770828129RGXT1 (rhamnogalacturonan xylosyltransferase 1)Encodes a protein with UDP-xylose-dependent xylosyltransferase activity, which transfers Xyl onto L-fucose and (albeit less efficiently) L-arabinose. The linkage to L-fucose was shown to be preferentially to the O-4 position. Analysis of mutant containing T-DNA insertion in this gene indicate that the RGXT1 protein might be involved in the synthesis of the α-D-Xyl-(1,3)-α-L-Fuc-(1,4)-L-Rha structure in pectic rhamnogalacturonan II.O.I.C.G.S.X.
0.714e-128458At4g01220828028-F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;POMO.I.C.G.S.X.
0.651e-94347At1g56550842108UDP-xylosyltransferaseF:UDP-xylosyltransferase activity;P:biological_process unknown;C:endoplasmic reticulum;POMO.I.C.G.S.X.
0.034e-240At1g14760838041KNATM (KNOX ARABIDOPSIS THALIANA MEINOX)F:transcription activator activity;P:leaf proximal/distal pattern formation;C:nucleus, cytoplasm;PO.I.C.G.S.X.
0.011e-138At5g53760835457MLO11 (MILDEW RESISTANCE LOCUS O 11)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).O.I.C.G.S.X.
0.011e-138At4g12740826886adenine-DNA glycosylase-related / MYH-relatedF:hydrolase activity, 4 iron, 4 sulfur cluster binding, catalytic activity, endonuclease activity;P:DNA repair, base-excision repair;C:unknown;MOBFPVAO.I.C.G.S.X.
0.025e-136At3g03130821080unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e-242PsAffx.C53000011_atGlycine maxPsAffx.C53000011--7e+0At4g00030plastid-lipid associated protein PAP / fibrillin family proteinO.I.C.G.S.X.
0.034e+032Contig17032_atHordeum vulgareContig17032--2e-5At4g01220-O.I.C.G.S.X.
0.052e-242Os05g0386900Oryza sativaAK071425.1-Conserved hypothetical protein3e-8At4g01220-O.I.C.G.S.X.
0.284e-1273PtpAffx.211581.1.S1_atPopulus trichocarpapmrna22696hypothetical protein-3e-54At4g01220-O.I.C.G.S.X.
0.031e-138TaAffx.84018.1.S1_atTriticum aestivumCA646263--4e+0At4g00880auxin-responsive family proteinO.I.C.G.S.X.
0.033e+0321620078_atVitis viniferaCD798888hypothetical protein LOC100259386-2e-2At5g60550GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2)O.I.C.G.S.X.
0.031e-240ZmAffx.262.1.A1_s_atZea maysAI670379acidic ribosomal protein P3-3e+0At4g27410RD26 (RESPONSIVE TO DESICCATION 26)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage