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| Gene ID | At3g62980 |
| Gene name | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) |
| Functional description | Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.14 | 7e-14 | 79 | At4g03190 | 828045 | GRH1 (GRR1-LIKE PROTEIN 1) | Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression. | O.I. | C.G. | S.X. | |
| 0.08 | 2e-5 | 52 | At3g26810 | 822296 | AFB2 (AUXIN SIGNALING F-BOX 2) | F:auxin binding, ubiquitin-protein ligase activity;P:stamen development, pollen maturation, response to molecule of bacterial origin;C:plasma membrane;PMOFB | O.I. | C.G. | S.X. | |
| 0.09 | 2e-5 | 52 | At1g12820 | 837838 | AFB3 (AUXIN SIGNALING F-BOX 3) | F:auxin binding, ubiquitin-protein ligase activity;P:stamen development, pollen maturation, response to molecule of bacterial origin;C:cellular_component unknown;PMFOB | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At5g45510 | 834587 | leucine-rich repeat family protein | F:protein binding;P:unknown;C:cytosol;MOPBFVA | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At3g12700 | 820452 | aspartyl protease family protein | F:aspartic-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;PMFO | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g09500 | 830809 | 40S ribosomal protein S15 (RPS15C) | F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAF | O.I. | C.G. | S.X. | |
| 0.02 | 4e+0 | 34 | At5g49980 | 835062 | AFB5 (Auxin F-Box protein 5) | F:ubiquitin-protein ligase activity;P:unknown;C:unknown;PMOF | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g52190 | 835295 | sugar isomerase (SIS) domain-containing protein | F:sugar binding;P:carbohydrate metabolic process;C:unknown;BAOP | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.14 | 7e-24 | 113 | GmaAffx.36982.1.S1_at | Glycine max | BM092957 | - | - | 1e-24 | At3g62980 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) | O.I. | C.G. | S.X. | |
| 0.07 | 9e-18 | 91 | Contig7409_at | Hordeum vulgare | Contig7409 | - | - | 2e-17 | At3g62980 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) | O.I. | C.G. | S.X. | |
| 0.05 | 5e-10 | 67 | Os05g0150500 | Oryza sativa | AK121600.1 | - | Cyclin-like F-box domain containing protein | 7e-10 | At3g62980 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) | O.I. | C.G. | S.X. | |
| 0.16 | 1e-34 | 149 | PtpAffx.102029.1.A1_at | Populus trichocarpa | CV240650 | - | - | 4e-35 | At3g62980 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) | O.I. | C.G. | S.X. | |
| 0.05 | 3e-10 | 67 | Ta.23215.1.S1_at | Triticum aestivum | CD452856 | - | - | 1e-10 | At3g62980 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) | O.I. | C.G. | S.X. | |
| 0.03 | 2e-11 | 69 | 1618982_at | Vitis vinifera | CF413816 | hypothetical protein LOC100264085 | - | 2e-2 | At1g29390 | COR314-TM2 | O.I. | C.G. | S.X. | |
| 0.07 | 1e-13 | 77 | Zm.17222.1.A1_at | Zea mays | CK144311 | - | - | 2e-13 | At3g62980 | TIR1 (TRANSPORT INHIBITOR RESPONSE 1) | O.I. | C.G. | S.X. |
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