CoP: Co-expressed Biological Processes

Homology analysis

Gene ID At3g61490

Gene name glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein

Functional description F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.	Other DB
0.15	1e-33	145	At3g48950	824056	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	S.X.
0.18	1e-20	101	At4g23500	828450	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:cell wall;FPBOMA	O.I.	C.G.	S.X.
0.03	5e-11	69	At3g16850	820938	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:vacuole, plant-type cell wall;PBFOMA	O.I.	C.G.	S.X.
0.03	1e-8	61	At5g49215	834981	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PBFOMA	O.I.	C.G.	S.X.
0.11	1e-8	61	At2g23900	816922	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMA	O.I.	C.G.	S.X.
0.02	1e-2	42	At3g24860	822084	hydroxyproline-rich glycoprotein family protein	F:transcription factor activity;P:biological_process unknown;C:chloroplast;POMVFB	O.I.	C.G.	S.X.
0.01	1e-2	42	At1g62970	842599	DNAJ heat shock N-terminal domain-containing protein	F:heat shock protein binding;P:protein folding;C:cellular_component unknown;MFOBPVA	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.15	1e-3	46	Gma.15979.2.S1_at	Glycine max	BE807671	-	-	7e-4	At3g61490	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.09	4e-10	65	Contig8722_at	Hordeum vulgare	Contig8722	-	-	3e-3	At4g23500	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.07	4e-7	57	Os03g0124900	Oryza sativa	BI804847	-	Glycoside hydrolase, family 28 protein	1e-2	At4g33440	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.18	1e-9	65	Ptp.1970.1.S1_s_at	Populus trichocarpa	CV230945	hypothetical protein	-	9e-10	At3g61490	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.09	3e-12	73	Ta.6184.1.S1_at	Triticum aestivum	BJ242002	-	-	4e-12	At3g61490	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.
0.03	2e-1	36	1618657_at	Vitis vinifera	CF211626	hypothetical protein LOC100243180	-	2e-1	At4g20370	TSF (TWIN SISTER OF FT)	O.I.	C.G.	S.X.
0.06	8e-8	57	Zm.7154.1.A1_at	Zea mays	AY111597.1	-	-	4e-7	At3g61490	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage