Homology analysis

Gene ID At3g59030
Gene name TT12 (TRANSPARENT TESTA 12)
Functional description Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.031e-242At4g219036241480antiporter/ drug transporterF:antiporter activity, drug transporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.S.X.
0.025e-240At4g10480826640nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABVO.I.C.G.S.X.
0.025e-240At4g00350827306MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.S.X.
0.022e-138At4g21910828280MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.S.X.
0.022e-138At1g61890842485MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.S.X.
0.018e-136At5g51480835222SKS2 (SKU5 SIMILAR 2)F:oxidoreductase activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;FBPMOAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.033e-138Gma.10447.2.A1_a_atGlycine maxCD408098--1e+0At5g20045unknown proteinO.I.C.G.S.X.
0.034e-136Contig10328_atHordeum vulgareContig10328--4e-2At5g65380ripening-responsive protein, putativeO.I.C.G.S.X.
0.103e-552Os12g0615700Oryza sativaAK058512.1-TRANSPARENT TESTA 12 protein2e-5At3g59030TT12 (TRANSPARENT TESTA 12)O.I.C.G.S.X.
0.193e-1997PtpAffx.224485.1.S1_s_atPopulus trichocarpapmrna43065hypothetical protein-2e-19At3g59030TT12 (TRANSPARENT TESTA 12)O.I.C.G.S.X.
0.048e-136Ta.24213.1.A1_atTriticum aestivumBJ253133--5e-3At1g11670MATE efflux family proteinO.I.C.G.S.X.
0.104e-12711607560_atVitis viniferaBQ797165hypothetical protein LOC100255800-5e-12At3g59030TT12 (TRANSPARENT TESTA 12)O.I.C.G.S.X.
0.021e+034Zm.11859.1.S1_atZea maysCN844838diphthamide biosynthesis protein 3-2e-2At2g15910CSL zinc finger domain-containing proteinO.I.C.G.S.X.



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