Homology analysis

Gene ID At3g58780
Functional description One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.751e-142506At2g42830818883SHP2 (SHATTERPROOF 2)AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).O.I.C.G.S.X.
0.255e-28125At4g09960826586STK (SEEDSTICK)a MADS box transcription factor expressed in the carpel and ovulesO.I.C.G.S.X.
0.203e-26119At4g18960827631AG (AGAMOUS)Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs.O.I.C.G.S.X.
0.077e-1271At1g77980844133AGL66 (AGAMOUS-LIKE 66)Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.223e-21103GmaAffx.7093.1.S1_atGlycine maxBM092487--3e-21At3g58780SHP1 (SHATTERPROOF 1)O.I.C.G.S.X.
0.133e-961Contig11029_atHordeum vulgareContig11029--2e-10At2g42830SHP2 (SHATTERPROOF 2)O.I.C.G.S.X.
0.232e-1377OsAffx.23186.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.272e-654PtpAffx.162863.1.S1_atPopulus trichocarpaBU882965hypothetical protein-1e-6At3g58780SHP1 (SHATTERPROOF 1)O.I.C.G.S.X.
0.064e-1065Ta.27776.1.S1_atTriticum aestivumBJ274612MADS-box transcription factor TaAGL2-3e-12At4g18960AG (AGAMOUS)O.I.C.G.S.X.
0.163e-17871619742_atVitis viniferaAF265562.1MAD-box transcripion factor-2e-16At3g58780SHP1 (SHATTERPROOF 1)O.I.C.G.S.X.
0.122e-1685Zm.270.1.S1_atZea maysU31522.1hypothetical protein LOC100216659-8e-19At2g42830SHP2 (SHATTERPROOF 2)O.I.C.G.S.X.

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